Microbacterium sp. PAMC 28756: AXH82_12310
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Entry
AXH82_12310 CDS
T04312
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mip
Microbacterium sp. PAMC 28756
Pathway
mip03420
Nucleotide excision repair
mip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXH82_12310
03430 Mismatch repair
AXH82_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mip03400
]
AXH82_12310
Enzymes [BR:
mip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXH82_12310
DNA repair and recombination proteins [BR:
mip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXH82_12310
MMR (mismatch excision repair)
Other MMR factors
AXH82_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMG84094
LinkDB
All DBs
Position
2587916..2589637
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AA seq
573 aa
AA seq
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MSALDALDERQRAAASVLRGPVAVLAGAGTGKTRVITHRIAHGVDTGAYSPSRVMAVTFT
AKAAGELRGRLRALGVEGVAARTFHAAALAQLNFFWPTLAGAPAPSIIDNKVRLLGQAAD
AIRLRPSTATLRDIAAEIEWRKVSMISIDRYAELGRPISGIDPTQLVELMRGYEALKDER
HQLDFEDVLLACAGMLETEPRVAAAVHEQYRHFTVDEFQDVSPLQNRLLELWLGDRHDIC
VVGDASQTIYSFAGAEQRFLLEFERRHPDATVIRLETNYRSQAPILTAANALMHGRPGAL
ELVPAREQFTAEPPTVTAYDTEAEEAAGIAAGVAARIAGGASPAEIAVLYRAHAQSAVLQ
QALAAEGIATSVLGGTRFFAMPEVRQAILALRAAAVAPTEHGFLPGVRRVLRELGLTEEP
PAAGGAQRDGWEARRAILRLAEEAGPETTLRSFSDDLMARAKDQHEPTMRTVTLSTLHAA
KGLEWPHVYLAGWAEGSLPISYATTFEAVDEERRLAYVGVTRAARTLELSWARTAGRGER
APSRFLAEMGTTARGTGILRETAPNATRSRRPR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcactcgatgccctcgacgagcggcagcgagcggcggcctcggtcctgcggggc
ccggtggcggtgctcgcgggggccgggacgggcaagaccagggtcatcacgcatcgcatc
gcgcacggggtggacacgggtgcctactcgccgtcgcgcgtgatggcggtcacgttcacc
gcgaaggccgccggcgagctccgcggccgcctccgtgcgctcggggtcgagggcgtggcc
gcccgcacctttcacgcggcggccctcgcacagctcaacttcttctggcccaccctggcc
ggtgcgcccgcgccgtcgatcatcgacaacaaggtgcgcctgctgggccaggccgccgat
gccatccgcctgcgtccgagtacggcgaccctgcgcgacatcgccgcggagatcgagtgg
cggaaggtctcgatgatctcgatcgaccggtacgcggagctcggtcgcccgatcagcggg
atcgaccccacgcagctcgtggagctgatgcgcggctacgaggcgctcaaggacgagcgt
catcaactcgacttcgaggacgtgctgctcgcctgcgcggggatgctggagaccgagccc
cgggtcgcggccgccgtccacgagcagtaccggcacttcaccgtcgacgagttccaggat
gtgtcgccgctccagaaccggctcctggagctctggctgggcgatcggcacgacatctgc
gtggtcggcgacgccagccagacgatctactcgttcgccggggcggagcagcgcttcctc
ctcgagttcgagcggcggcaccccgacgcgacggtcatccggctggagacgaactaccgg
tcccaggcccccatcctgacggcggcgaacgccttgatgcacggcaggcccggcgcgctg
gagctggtcccggcccgggagcagttcacggcggagccgccgacggtcaccgcgtacgac
acggaggccgaggaggccgcgggcatcgccgccggcgtcgcggcccggatcgccgggggc
gcgtccccggcggagatcgccgtgctgtatcgcgcccatgcgcagtccgcggtgctccag
caggcgctcgccgccgagggcatcgccacctcggtgctcgggggcacgcggttcttcgcc
atgccggaggtgcgccaggcgatcctcgcgctccgtgcggcggcggtggcgccgaccgag
cacggcttcctgcccggggtgcgacgggtgctgcgcgagctgggactcaccgaggagcct
ccggcagccgggggagcccagcgcgacgggtgggaggcgcggcgtgccatcctccgtctc
gcggaggaggcggggccggagacgactctgcggtccttcagcgacgacctcatggcccgc
gcgaaggatcagcacgagccgacgatgcggacggtgacgctgtcgacgctgcatgccgcg
aagggcctggagtggccgcacgtgtacctggccggatgggcggaggggtctctgccgatc
tcctacgccacgacgttcgaggccgtcgacgaggaacggcgtctggcctacgtcggggtc
acgcgggctgcgcgcacgctggagctgtcgtgggcacggacggcggggcgcggcgagcgg
gcgccgtcgcggttcctggcggagatgggcacgacggcgcgcggcacaggcattctgcgc
gaaaccgcaccgaacgccacgcgatcccgccgtccgcgctga
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