Microbacterium sp. PAMC 28756: AXH82_13095
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Entry
AXH82_13095 CDS
T04312
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mip
Microbacterium sp. PAMC 28756
Pathway
mip00300
Lysine biosynthesis
mip00470
D-Amino acid metabolism
mip01100
Metabolic pathways
mip01110
Biosynthesis of secondary metabolites
mip01120
Microbial metabolism in diverse environments
mip01230
Biosynthesis of amino acids
Module
mip_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXH82_13095
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXH82_13095
Enzymes [BR:
mip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AXH82_13095
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FAS_AT_central
Motif
Other DBs
NCBI-ProteinID:
AMG84225
LinkDB
All DBs
Position
2765087..2766547
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AA seq
486 aa
AA seq
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MCASARDPSHDWCSVLDSAATLAPDWLVVPEDPNDLAPGVWPASATRDDDGSLVLAGVPA
PELARTYGTPLLVLDEDEVRRRARAFRDAFDRAASAHGTTAQVYYAGKAFLCTTVARWVV
DEGLRIDVCTGGELEVALAAGVAPASLGFHGNNKSVAELERAVALGIGTIVVDSAIEIER
LAAITARTDTVQRVMVRVISGVHAETHDFLATAHEDQKFGFPLAEAEVAVARIREIPGLE
FAGLHCHIGSQIFGVAGFRESASRVLELHAALLEDGPVPQLNLGGGFGIAYTRVDDPTPI
DELADGIVAAVAEGCAARGIAVPALSFEPGRAIVGTAGVTLYEVGTTKDVTVASGATRRY
VSVDGGMSDNARTALYGASYSARLASRTGTDEPQLSRVVGKHCESGDIVVDHEYLPGDVT
PGDLLAVPATGAYCASLASNYNHVPRPPIVAVREGRSRVIVRGETVHDLLARDAGIDGAH
APEGAR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcctccgcccgagatccgtcccacgattggtgttccgtgctcgactctgccgcc
acgctcgctccggactggctcgtcgtccccgaagatccgaacgatctcgcgccgggtgtc
tggccggcttcggccacgcgcgacgacgacggcagcctggtgctcgccggagtgccggcg
cccgagctcgcccgcacctacggcacgccgctcctcgtgctcgatgaggacgaggtgcgg
cgccgcgcccgggccttccgcgacgcgttcgaccgcgccgcctcggcgcacggcacgacc
gcgcaggtgtactacgccggcaaggccttcctatgcacgacggtcgcccgctgggtcgtc
gacgaggggctgcgcatcgacgtgtgcaccggcggcgagctcgaggtcgccctcgccgcg
ggggtcgcaccggcctcgctgggcttccacggcaacaacaagtcggtcgccgagctggag
cgcgctgtcgctctcggcatcggcacgatcgtcgtcgacagcgcgatcgagatcgagcgc
ctcgccgccatcacggcccggacggacaccgtgcagcgcgtcatggtccgggtcatcagc
ggcgtccacgccgagacccacgacttcctcgccacggcccacgaggaccagaagttcggc
ttcccgctcgccgaggccgaggtcgccgtggcccgcatccgcgagatcccggggctggag
ttcgccggcctgcactgccacatcggctcccagatcttcggcgtggccgggttccgcgaa
tccgcgtcgcgcgtgctcgaactgcacgccgccctcctcgaggacggcccggtgccgcag
ctgaacctcggcggcggcttcggcatcgcctacacccgcgtcgacgaccccacgccgatc
gacgagctggccgacggcatcgtggcggcggtcgccgagggctgcgcggcgcggggcatc
gcggtgcccgcgctctcgttcgagcccgggcgcgcgatcgtcggcacggcgggcgtgacc
ctctacgaggtcggcacgacgaaggacgtcacggtcgcctccggggccacgcggcggtac
gtcagcgtcgacggcgggatgagcgacaacgcccgtacggctctctacggtgccagctac
tccgcccgcctcgcctcgcggacggggacggacgagccccagctgagccgagtggtcggc
aagcactgcgagtccggcgacatcgtcgtcgaccacgagtacctccccggagacgtgaca
ccgggcgatctgctggccgtcccggcgaccggcgcctactgcgcctcgctcgcgagcaac
tacaaccacgtcccgcggccgcccatcgtggcggtgcgggaggggcgctcgcgggtgatc
gtccgcggcgagaccgtccacgacctgctggcccgcgacgcgggcatcgacggggcgcac
gcccccgagggagcacgatga
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