Microbacterium sp. PAMC 28756: AXH82_13355
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Entry
AXH82_13355 CDS
T04312
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mip
Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mip03016
]
AXH82_13355
Enzymes [BR:
mip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXH82_13355
Transfer RNA biogenesis [BR:
mip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXH82_13355
Prokaryotic type
AXH82_13355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AMG84272
LinkDB
All DBs
Position
2823338..2824231
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AA seq
297 aa
AA seq
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MATPGILLVDKPGGLTSHDVVGRTRRAFGTRKVGHAGTLDPMATGLLVIGIEGATRLLTY
IVGAEKTYEATIRLGAVTSTDDAEGEILHRADESALAAIEEAAIDAGVAALTGAISQVPS
AVSAIKVDGRRAYDRVRAGEEVVLPPRDVVVSRFDVVARRRDDHAIDLDVVVDCSSGTYI
RSLARDLGAALGVGGHLTALRRTRVGPFDVRDAVTIDALEGAPVLTPAAAAGRVLSVLPV
TADEARDLRHGKRLAGQAVRLDGPLAAAIEDDGTLVGIVEKRGADVKSAMNMPEVSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccggcatcctcctcgtcgacaagcccggcgggctgaccagtcacgatgtg
gtcggccgcacccgacgggccttcgggacccgcaaggtaggccacgccgggactctcgac
ccgatggccaccggactgctcgtcatcggcatcgagggggcgacccgcctcctcacctac
atcgtgggcgcggagaagacctacgaggcgaccatccggctcggtgccgtcacctccacg
gatgacgcggagggcgagatcctccaccgcgcggatgagagcgccctcgcggcgatcgag
gaggcggcgatcgatgccggagtggccgcgctgacgggcgcgatctcccaggtcccgagt
gcggtgtcggcgatcaaagtcgacggccgccgcgcctacgaccgcgtccgtgcgggggag
gaagtcgtcctcccgccgcgagacgtcgtcgtgtcccgattcgacgtcgtcgcgcgtcgc
cgcgacgaccacgcgatcgacctcgatgtcgtcgtggactgctcgtccggaacctacatc
cgctcgctggcccgcgatttgggtgccgccctcggtgtcggcggccacctgaccgccctc
cgccgcacccgtgtcggcccgttcgacgtgcgtgacgccgtgacgatcgacgccctcgag
ggcgctcccgtgctcacccccgccgccgccgccggccgcgtgctctccgtcctccccgtc
acggcggacgaggcgcgggacctgcgacacggcaagcgcctcgccgggcaggcggtgcgg
ctggacggcccgctcgcggccgccatcgaagacgacggcacgctcgtggggatcgtcgag
aagcgcggtgccgatgtgaagagcgccatgaacatgccggaggtctcccgatga
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