Microbacterium sp. PAMC 28756: AXH82_14080
Help
Entry
AXH82_14080 CDS
T04312
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mip
Microbacterium sp. PAMC 28756
Pathway
mip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXH82_14080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mip03400
]
AXH82_14080
Enzymes [BR:
mip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AXH82_14080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AXH82_14080
DNA repair and recombination proteins [BR:
mip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXH82_14080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
DUF7560
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AMG84401
LinkDB
All DBs
Position
2963900..2964763
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEVVRSGLAPAAVDAVITGVSVFDERALTRHTAGAADFVQRLEGRRFTAAARRG
KFLWLPVDDGDSALIAHLGMSGQMLLRAPDAPTERHERVRLGIEHPRHGELAIVFADQRT
FGSLAVDALIADGPSRIPTQVAHIARDPLDPFFDDRVFRAALARRHSAIKRVLLDQGVVS
GIGNIYADESLWAARIHPETPADALPTRAVNRLLAEVRSVLQKALAEGGTSFDAQYVNVN
GQAGYFAHSLNAYGRGGKPCPRCGTPITRAAFMNRSSHFCPRCQRRR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctccccgaggtcgaggtcgtccgctccggcctcgcccctgccgcggtcgac
gcggtcatcacaggcgtcagcgtcttcgacgaacgcgccctcacccggcataccgccgga
gctgcggacttcgtccagcgtctggagggtcgccgcttcaccgcggccgcgcggaggggc
aagttcctctggctccccgtggacgatggcgactccgctctgatcgcgcatctgggcatg
agcggccagatgctgctccgcgcgccggacgcgccgaccgagcgccacgagcgtgtccgc
ctcgggatcgagcatccccgacacggcgagctcgcgatcgtgttcgcggatcagcggacg
ttcggctccctcgccgtcgacgctctcatcgccgacggcccctcccgcatcccgacacag
gtcgcgcacatcgctcgcgacccgctcgacccgttcttcgacgaccgggtcttccgggcc
gctctcgcccggcggcacagcgcgatcaagcgggtgctgctggaccagggcgtggtgagc
ggcatcggcaacatctacgccgacgagtcgctgtgggcggcccgcatccatccggagaca
ccggccgacgctctgccgacccgagccgtgaatcgcctgctcgcggaagtgcggtcggtc
ctgcagaaggctctcgccgagggcggcacgagcttcgacgcccagtacgtcaacgtcaac
gggcaggccggttacttcgcgcactccctgaacgcctacggtcgcggagggaagccctgt
ccgcgctgcggcacgccgatcacccgtgccgcgttcatgaaccgctcttcgcacttctgc
ccgcgctgccaacggaggcgctga
DBGET
integrated database retrieval system
