Microbacterium sp. PAMC 28756: AXH82_15320
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Entry
AXH82_15320 CDS
T04312
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mip
Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mip03016
]
AXH82_15320
Enzymes [BR:
mip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AXH82_15320
Transfer RNA biogenesis [BR:
mip03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AXH82_15320
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMG84611
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All DBs
Position
3205477..3206670
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AA seq
397 aa
AA seq
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MTEYSVISETEEFRAACAALAAGTGPVAVDVERASGFRYSQRAYLVQVFRREAGVFLFDP
PAIGDFAPLQEAIGDVEWVLHAASQDLPSLRELHLEPKEIFDTELASRLLGHDRVGLAAV
VEDTLGITLKKEHSAADWSTRPLPDSWLDYAALDVLHLVDVRDALVAELEEQGKTAFAAQ
EFAATLARAPKAPREDPWRRLSGLHQVRGARNLAVARALWEAREMYAQQQDISPGRLVPD
RSLVAAVLANPPSKQALAGVKEFQGRASRTQLDRWWQAIVDGRAAETLPRERVPSDALPP
PRAWGDRNPEADARLKAARPAVEAVAEELGMPTENLLTPEYLRRVAWDGPGTTAEEIGAA
LSALGARPWQVEQTAQKIADAFVEAAQSPDTTSATAS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatactccgtgatctccgaaaccgaggagttccgtgccgcctgcgctgcgctc
gccgcaggcaccgggccggtcgccgtcgatgtcgagcgggcgtccggcttccgctactcg
cagcgggcctatctggttcaggtgttccggcgcgaggccggggtgttcctgttcgacccg
cccgcgatcggcgacttcgctcccctgcaggaggccatcggcgacgtcgagtgggtgctc
cacgcggccagccaggacctcccgtcgctgcgcgagctgcacctggagccgaaggagatc
ttcgacaccgagctggcgtcccgtctgctcggtcacgaccgggtgggtctggccgccgtc
gtcgaggacacgctcggcatcaccctgaagaaggagcactcggcggccgactggtccacc
cgtccgctgcccgactcctggctggactatgccgcgctcgacgtgctgcacctcgtcgac
gtccgcgacgccctcgtcgccgagctcgaggaacagggcaagaccgcgttcgccgcgcag
gagttcgccgccaccctggcgcgcgccccgaaggccccgcgcgaagacccctggcggcgg
ctgagcgggctccaccaggtgcgcggcgcccgcaacctcgccgtcgcccgcgccctgtgg
gaggcgcgcgagatgtacgcgcagcagcaggacatctcgcccgggcgcctcgttcccgac
cgctccctcgtcgccgcggtcctcgccaaccccccctccaagcaggctctcgcgggagtc
aaggagttccagggtcgcgcgagccgcacccagctcgaccggtggtggcaggcgatcgtc
gacggccgtgccgccgagacgctgccgcgcgagcgtgtgcccagcgacgcactcccgccg
ccccgcgcctggggcgaccgcaacccggaggcggacgcccgcctgaaggccgcccgtccc
gccgtcgaggccgtcgcggaggagctgggcatgcccaccgagaacctcctcacgcccgag
tacctgcgccgggtcgcgtgggacggccctgggacgacggcggaggagatcggcgccgcg
ctctccgcgctcggagcccgcccctggcaggttgaacagactgcacagaagatcgccgac
gcctttgtagaggcggcgcaatcgccggacaccacgtccgcgaccgcttcgtag
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