Microbacterium sp. PAMC 28756: AXH82_15405
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Entry
AXH82_15405 CDS
T04312
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mip
Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mip03032
]
AXH82_15405
03400 DNA repair and recombination proteins [BR:
mip03400
]
AXH82_15405
Enzymes [BR:
mip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AXH82_15405
DNA replication proteins [BR:
mip03032
]
Prokaryotic type
DNA Topoisomerases
AXH82_15405
DNA repair and recombination proteins [BR:
mip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXH82_15405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AMG84628
LinkDB
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Position
3226532..3228973
Genome browser
AA seq
813 aa
AA seq
DB search
MPKTPPPEPVEERIQDIDLSHEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILFQMAE
MGLRPDRGHVKSARVVGEVMGKLHPHGDSAIYDALVRLAQEWALRVPLVDGHGNFGSLDD
GPAAARYTEARLAAPALSLTENLDEDVVDFIPNYDGQFQQPAVLPAAFPNLLVNGASGIA
VGMATNMAPHNLIEVVAAATHLLENPDATTEDLMEYVPGPDFPSGGILMGLDGVKDAYTT
GRGALKVRGRTSIEPLGPRRTGIIVSELPYMVGPERLIEKIRDAVQAKKLQGISDVTDLT
DRNHGLRVAIGIKTGFDPNAVLEQLYRLTPLEDSFSINNVALVDGQPRTLGLKEMLSVYV
GHRIEVITRRSRYRLARREERLHLVEGLLIAILDIDEVIQVIRSSDDTEQARTRLRSVFD
LSEPQAEYILELRLRRLTKFSRIELEAERDALLAEIASLRELLASPALLRAAVARELDAV
AEAYGTPRRTLLMNAAPPKPRATKGAVDLQIADAPTTVVLSTTGRAVRVDLGEGQELTAP
ARRSKHDAILATVETTVRGEVGALTSTGRVVRFSPVDLPSVPGTSVQLAAGTPLRDYLGI
TTKSERILGFVRFDSETPVALGTAQGIVKRIVPSTLPVRPDLEVIGLKTGDSVVGVADAA
DDADLVFLTTDAQLLRFSASTVRPQGAPAGGMAGIKLGSGASVLFFGAVRPDTDAVVATV
SGAESILPGTDPGRAKVSAFTEYPSKGRATGGVRAHAFLKGEDRLTVAWVGPNPALAVDP
TGAVRKLPDVGARRDASGQPIDGVIGSIGRTLV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaccccgccgcccgagcctgtcgaggaacgcatccaggacatcgatctctct
cacgagatgcagggctccttcctggagtacgcgtactccgtcatctattcgcgggcactc
ccggacgccagagacggcctcaagccggtgcagcgccgcatcctgttccagatggccgag
atgggcctgcgcccggaccgcggccatgtgaagagcgcccgggtcgtcggcgaggtcatg
ggaaaactgcacccccatggcgactcggcgatctatgacgcgctcgtccgcctcgcgcag
gagtgggccctccgggtgccgctcgtcgacggtcacggcaacttcggatccctggacgac
ggccccgccgccgcgcggtacaccgaggcgcgtctcgccgcccccgcgctctcgctcacc
gagaacctcgacgaggacgtcgtcgacttcatcccgaactacgacggccagttccagcag
ccggccgtgctgcccgcggctttccccaacctgctcgtcaacggtgccagcggcatcgcg
gtgggcatggcgaccaacatggcgccgcacaacctcatcgaggtcgtcgccgcggcgacc
cacctgctcgagaacccggacgccaccaccgaggacctcatggagtacgtccccggtccc
gacttcccgtcgggcgggatcctcatggggctcgacggcgtcaaggacgcctacacgacc
gggcgcggtgccctcaaggtccgcgggcggacgtcgatcgagccgctgggcccccggcgc
acgggcatcatcgtgtcggagctgccctacatggtcggtccggagcgtctcatcgagaag
atccgcgacgcggtgcaggcgaagaagctgcagggcatcagcgacgtcaccgatctcacc
gaccgcaaccacggcctccgcgtcgccatcgggatcaagaccggtttcgatccgaacgcc
gtgctggagcagctctaccggctcaccccgctggaggactccttcagcatcaacaacgtc
gccctcgtcgacggccagccccgcaccctcgggctcaaggagatgctcagcgtctacgtc
ggccaccgcatcgaggtcatcacccgccgcagccggtaccgtctcgcccgccgggaggag
cgcctgcacctggtggagggtctgctcatcgcgatcctcgacatcgacgaggtcatccag
gtcatccggtcgtcggacgacaccgagcaggcccgcacccggctccggtccgtgttcgac
ctcagcgagccgcaggccgagtacatcctcgagctgcggctgcgacgtctgaccaagttc
tcgcgcatcgagctcgaggcggaacgcgacgccctcctcgcggagatcgcgtcgctgcgc
gagctgctcgccagcccggccctgctgcgcgcggccgtcgcccgggagctggacgccgtg
gccgaggcgtacgggacgccgcggcgcaccctgctgatgaacgcggccccgccgaagccc
cgtgcgacgaagggcgccgtcgacctgcagatcgccgacgcgccgaccaccgtcgtcctc
tcgacgacgggccgcgccgtgcgcgtggacctcggcgaaggacaggagttgacggctccg
gcccggcggagcaagcacgatgccatcctcgcgacggtcgagacgacggtccgcggcgag
gtcggggcgctcaccagcacgggacgcgtcgtccgcttctcccccgtggacctgccctcg
gtgccgggcacctcggtgcagctcgccgcggggactccgcttcgcgactacctggggatc
acgaccaagagtgagcgcatcctcgggttcgtccgtttcgacagcgagacccccgtcgcg
ctcggcaccgcccagggcatcgtgaagcgcatcgtgccgtcgaccctgcccgtgcggccc
gacctggaggtcatcggcctcaagaccggagactccgtggtcggtgtggccgacgcggcg
gatgacgccgacctcgtgttcctgacgacggatgcgcagctgctgcggttctcggcctcg
acggtccgcccccagggcgcgccggccggcggcatggcgggcatcaagctcggctcgggc
gcctccgtcctcttcttcggcgccgtccgcccggacaccgatgccgtcgtcgccacggtg
tcgggcgcggagagcatcctgcccggcaccgatcccggccgcgcgaaggtctcggccttc
acggaatacccgtcgaagggccgcgcgaccggcggcgtccgcgcccacgccttcctgaag
ggcgaggaccgcctcaccgtcgcctgggtcggcccgaacccggctctggccgtcgacccc
accggcgcggtgcgcaagctgccggacgtgggggcacgacgcgacgcctccggtcagccg
atcgacggcgtcatcggcagcatcggccgcacgctcgtctga
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