Microbacterium sp. PAMC 28756: AXH82_16520
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Entry
AXH82_16520 CDS
T04312
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mip
Microbacterium sp. PAMC 28756
Pathway
mip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXH82_16520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mip03400
]
AXH82_16520
DNA repair and recombination proteins [BR:
mip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXH82_16520
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXH82_16520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
AAA_23
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AMG84827
LinkDB
All DBs
Position
complement(3454218..3457106)
Genome browser
AA seq
962 aa
AA seq
DB search
MPIVPVASPGKLSVRGARVHNLKNVDIDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLW
ARIGVPHCPVCGEKIQRQTVQQIADQLMELPERTRYQVVAPIVSQKKGEFVDLFRELGAK
GYSRAIVDGELIQLAEPPTLKKSYKHDIAVVVDRLVASPDILGRVTDSVETALGLAGGVV
QINYVDGEGDDAWQTFSEKLACPNGHALTLTEIEPRTFSFNAPFGACPACSGLGTRMSVD
VDLMLGDEDLSIREGVIIPWTTQGKGLFQYYERLLEGLSRDLDFSLDTPWRELHSDVKEA
VLRGENYKVTVKWRNRYGREMRYASGFEGVVPYIERQYLQAESDTQRSRWGEYLREVPCP
VCNGDRLKPEVLAVQVHGHSIAEVSHLSLADARAFMEKLHLTDREAKIAAQVLREIRLRL
DFLLQVGLSYLNLSRSAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IETLLTLRDLGNTLIVVEHDEETIEAADWVVDIGPGAGVNGGAVVHSGPYSALLADTESM
TGDYLSGRREIPMPAKRRKIDKKRMLSVVGARANNLRNVTADFPLGVLTAVTGVSGSGKS
SLVNDILYQVLASRLNGARTVPGKHTRVTGLDNLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRTLFSETPEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVDCEVCHG
KRYNRDTLAVHYKGKNIAEVLEMPIEEAAEFFEPIQAIHRYMKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLATELQRRSNGRSIYVLDEPTTGLHFEDVRKLLEVLNGLVDKGNTVIVI
EHNLDVIKSADWVIDLGPEGGSGGGTILATGTPEQIARVEESHTGQFLAEILGEGRSARK
AS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcgtccccgttgcttccccaggaaaactcagtgtccgcggcgcccgcgtgcac
aatctcaagaacgtcgacatcgacatcccccgcgactcgctggtggtcttcaccggcctc
tccggatcggggaagtcgagcctcgccttcgacacgatcttcgccgaggggcagcgtcgg
tacgtcgagtcgctgagcgcctacgcgcggcagttcctcggtcaggtcgaccggccggac
gtcgatttcatcgaggggctgagcccggcggtgtcgatcgatcagaagtcgacgaaccgc
aacccccggtccacggtcggcacgatcaccgagatctacgactacatgcgtctgctctgg
gcgcgtatcggcgttccgcactgtccggtgtgcggggagaagatccagcggcagaccgtc
cagcagatcgccgaccagctcatggagctcccggagcgcacccgctaccaggtggtcgcg
ccgatcgtctcccagaagaagggcgagttcgtcgacctgttccgggagctcggggcgaag
ggctactcgcgggcgatcgtcgacggcgagctcatccagctggccgagcctccgacgctc
aagaagagctacaagcacgacatcgcggtggtcgtcgaccgcctcgtcgcctcgcccgac
atcctcggacgcgtgaccgactcggtggagaccgctctcggtctcgccggtggggtcgtg
cagatcaactacgtggacggcgagggcgacgacgcctggcagacgttctcggagaagctc
gcgtgcccgaacggccacgcgctcaccctcaccgagatcgagccgcgcacgttctccttc
aacgcgccgttcggtgcctgccccgcctgctcgggcctcggcacccgcatgtcggtggac
gtcgatctgatgctcggcgacgaagacctctcgatccgcgagggcgtcatcatcccgtgg
accacgcagggcaaggggctcttccagtactacgagcgcctgctcgaaggactctcccgc
gacctcgacttctccctcgacaccccgtggcgcgaactgcactccgacgtcaaggaagca
gtcctgcgcggagagaactacaaggtcaccgtcaagtggaggaaccgctacggccgtgag
atgcgctacgcctccggtttcgagggcgtggtgccgtacatcgagcggcagtacctgcag
gccgagtccgacacccagcgcagccggtggggcgagtacctccgcgaggtcccgtgcccg
gtctgcaacggcgaccgtctcaagcccgaggtgctggccgtgcaggtgcacggtcactcc
atcgccgaggtctcccacctgagcctggccgacgcccgggccttcatggagaagctgcac
ctcaccgaccgcgaggccaagatcgccgcgcaggtgctccgtgagatccgcctgcgcctc
gacttcctcctccaggtcggtctgtcctacctcaacctcagccgttcggccggctcgctg
tcgggaggcgaggcccagcgcatccgcctcgccacgcagatcggctccggtctcaccggc
gtgctctacgtcctcgacgaaccgtcgatcggactgcaccagcgcgacaaccgccggctc
atcgagacgctgctcacgctgcgcgacctcgggaacaccctgatcgtcgtcgagcacgac
gaggagaccatcgaggccgcggactgggtcgtcgacatcggcccgggggccggcgtgaac
ggcggtgccgtggtccactccgggccctactcggcgctgctcgccgacaccgaatcgatg
accggggactacctctcgggccgtcgggagatcccgatgccggcgaagcgccgcaagatc
gacaagaagcgcatgctcagcgtcgtgggcgcccgcgccaacaacctccgcaatgtcacg
gccgacttcccgctcggcgtgctgaccgcggtcaccggcgtcagcggatccgggaagtcg
tccctcgtgaacgacatcctgtatcaggtgctcgcgtcgcggctcaacggggcgcggacg
gtgccgggcaagcacacgcgcgtgaccgggctcgacaacctcgacaaggtcgtgcacgtc
gaccaggcgccgatcggccgcaccccgcgatcgaacccggcgacctacaccggtgtcttc
gaccgcatccgcacgctcttcagcgagacgcccgaggcgaaggtccgcggctatcagccg
ggccggttcagcttcaacgtcaagggcggacgctgcgaggcgtgctcgggcgacggcacg
atcaagatcgagatgaacttcctcccggacgtgtacgtggactgcgaggtgtgccacggc
aagcggtacaaccgcgacaccctcgccgtgcactacaagggcaagaacatcgccgaggtg
ctggagatgcccatcgaggaggcggccgagttcttcgagccgatccaggccatccaccgc
tacatgaagaccctggtcgacgtggggctgggatacgtgcgcctcgggcagtccgcgacg
acgctctccggcggtgaggcgcagcgcgtgaagctcgcgaccgagctccagcgccgcagc
aacggtcggagcatctacgtgctcgacgagccgacgacgggtctgcacttcgaagacgtg
cgcaagctcctcgaggtgctgaacggtctggtcgacaagggcaacacggtcatcgtgatc
gagcacaacctcgacgtgatcaagtcggccgactgggtgatcgacctgggtccggagggt
ggttccggcggcggcacgatcctcgccaccggcacgccggagcagatcgcgcgggtcgag
gagagccacaccggccagttcctcgccgagatcctgggtgaggggcgctccgcgcggaag
gccagctga
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