Microcystis sp. MC19: B5D77_03980
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Entry
B5D77_03980 CDS
T05365
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
miq
Microcystis sp. MC19
Pathway
miq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5D77_03980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miq03400
]
B5D77_03980
DNA repair and recombination proteins [BR:
miq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5D77_03980
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B5D77_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_23
AAA_16
RsgA_GTPase
AAA_21
nSTAND3
nSTAND1
AAA_22
AAA_25
AAA_33
Viral_helicase1
DnaJ_CXXCXGXG
AAA_18
NACHT
MeaB
cobW
MMR_HSR1
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
AVQ70609
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All DBs
Position
779407..782319
Genome browser
AA seq
970 aa
AA seq
DB search
MAQTDSIRIRGARQHNLKNVDLELPRNQLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESL
SAYARQFLGQLDKPDVDAIEGLSPAISIDQKSTSHNPRSSVGTVTEIYDYLRLLFGRAGE
PHCPHCDRNIAPQTIDQMCDRVMELAEKTRFQILAPVIRGKKGTHKQLISSLASQGFARV
RIDGKVVELSEGIELDKKHFHDIEIVIDRLIKKEGLQERLVDSLTTCLKHSDGVAIVEIL
DENNEDNPEVTKEIVFSEKFACPEHGAVMEELSPRLFSFNSPYGACPNCHGLGSLRKFSA
DLVIPDPKQPVYSAIAPWSDKDNSYYLSLLYGLGQALGFEIQTPWQKLTKTQQDIILYGS
KEPIYFEDDYRYDTGRGYYREFAGVINILDRNYQETTSEVIKQRLEKYIVNQTCEVCHGK
RLKPEALSVRLGQYTITDFTRVPIRDCLQRINDCHLTPRQALIGELALKEIKARLQFLID
VGLDYLTLDRPAMTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNSKLLETLQ
RLRDLGNTLIVVEHDEETIRAADYVVDIGPKAGIHGGEIICQGSFKTLLKSKKSITGAYL
SGRKVIETPPQRRHGNGNALVLKNCHQNNLRNIDVTIPLGKLVSITGVSGSGKSTLINEL
LYPALQHHLTRLTPFPKELDKVEGLDAVDKVIVIDQSPIGRTPRSNPATYTGVFDIIREI
FTETIEAKARGYKAGQFSFNVKGGRCEACLGQGVNVIEMNFLPDVYVQCDVCKGARYNRE
TLQVKYKGYSIADVLDMTIEEALKVFENVPRATTRLQTLVDVGLGYCKLGQSAPTLSGGE
AQRVKLAAELSRRATGKTLYLIDEPTTGLSFYDVHHLLDVLQRLVDKGNSIIVIEHNLDV
IRCSDWIIDLGPEGGDKGGELIAVGTPETVAKCEQSYTGHYLAQALLQYPPKKRDNIREE
HRDNKANDQD
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaactgactcaatccgtatccgtggcgcacgacaacacaatctcaaaaatgtt
gatctcgaattaccccgcaatcagttgattgtttttaccggagtttcgggatcgggcaaa
tcttccctcgctttcgacaccatttttgccgagggacagcgccgctatgtggagtccctc
agcgcctacgcgcggcaatttttaggacaattagataaacccgatgtggatgcgatcgag
ggtttaagtccggctatttccattgaccaaaaatccacttcccacaatccccgctctagt
gtgggaactgttacggaaatttacgattacttgcgtttattgttcggtcgtgctggtgaa
ccccattgtccccattgcgatcgcaatattgccccccaaaccatcgatcaaatgtgcgat
cgagtgatggaattagccgagaaaacccgatttcaaatcttggccccggtaattcgcggc
aaaaaaggcacccataagcaattaatctctagtttggcctcccaaggctttgcccgggtg
cggattgacggcaaggtagtagaattatccgagggcatcgagttagataaaaaacatttt
catgatattgaaattgttatcgatcgcctgatcaaaaaagagggtttacaggaaagatta
gtggattctttaaccacttgtttaaagcattccgatggtgtagcgattgtggaaattctc
gatgagaataacgaagataatcccgaagttaccaaagaaattgtcttttccgagaaattt
gcctgtcccgaacacggggcagttatggaggaattatccccccgtttattctcttttaat
tctccctatggtgcttgtcccaactgtcacggattgggcagtttacggaaattttcggca
gatttagtcattccagacccaaaacaaccagtttattccgctattgccccctggtcagat
aaggataattcctactatctttctctcctctacggtttagggcaagctttaggttttgaa
atccaaaccccttggcagaaactaacaaaaacccagcaagatatcattctctatgggagt
aaagaaccgatatattttgaagatgattaccgttacgatactggccgcggttactatcga
gaatttgcgggagttatcaatatcttagataggaattatcaagaaaccacttcggaagtt
attaaacaaagactagaaaaatatattgttaaccaaacctgcgaagtttgtcacggaaaa
agattaaaaccggaagctttatcggtacgtttaggacaatatacgatcacggattttacc
agagttcccattcgggattgtttgcagagaattaatgattgtcatctaaccccaagacag
gcattaattggagaattggccctgaaagaaatcaaagcgagactacaatttttaatcgat
gtgggattagattatcttaccctcgatcgaccggcgatgactttatctgggggagaatcc
caacgaattcgattagccactcaaatcggttcaggattaacgggagtcttatacgttctc
gatgaacctagcatcggattacaccaaagagataatagtaaactgttagaaaccttgcaa
agattgcgagatttaggtaatactttaatcgtcgtcgaacacgatgaagaaacgattcgg
gcagccgattatgtggtcgatatcggtccgaaagcggggattcatggcggagaaatcatc
tgtcaaggcagttttaaaacccttttaaagtccaaaaaatcgataacaggggcctaccta
tcgggacgcaaagttattgaaactcctccccaaagaaggcatggaaatggtaatgcttta
gttttaaaaaattgccatcaaaataacctaagaaatatcgatgtaacgattcctttagga
aaattagtctcgattacgggagtatctggttcaggcaaatccaccctaattaatgagtta
ttatatccagctttacaacatcatttaacccgtttaactcccttccccaaagagttagat
aaagtggaaggattggacgcggttgacaaagtaattgtcatcgaccaatcaccgatagga
cgcactcctcggtcaaatcctgccacctatacgggggtttttgacattattcgcgagatt
ttcaccgaaaccatcgaagcaaaagctaggggttacaaagcggggcagttttcttttaat
gttaagggaggacgctgtgaagcttgcctaggccaaggggtaaacgtcatcgagatgaat
tttctccccgatgtctatgtgcagtgtgatgtgtgtaaaggagcgcgttacaatcgcgaa
accctacaggttaagtataaagggtattcgatcgccgatgtcttagatatgacgatcgag
gaagcattaaaagtctttgaaaatgtcccccgggccaccaccagattacaaactctcgtg
gatgtgggtttaggatactgtaaactcggtcaaagcgcccccactttatccggtggggaa
gcgcaaagggtgaaattagcggccgaattatcccgacgggccacgggaaaaaccctatat
ttgatcgatgaaccgactacgggtttatctttttatgatgtgcatcatctcttagatgtg
ttacaaagattggtcgataaaggtaattcgattatcgtcatcgaacacaatctcgacgtg
attcgctgtagcgattggattattgatttgggaccggaaggaggggataagggaggagaa
ttaatcgcggtgggaacaccggaaaccgtggctaaatgtgaacaatcctacactggtcat
tatcttgcccaagcattacttcaatatcccccaaaaaagcgggataatattagggaagaa
cacagagataataaagccaatgatcaagattag
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