KEGG   Microcystis sp. MC19: B5D77_03980
Entry
B5D77_03980       CDS       T05365                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
miq  Microcystis sp. MC19
Pathway
miq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:miq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B5D77_03980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:miq03400]
    B5D77_03980
DNA repair and recombination proteins [BR:miq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B5D77_03980
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      B5D77_03980
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_23 AAA_16 RsgA_GTPase AAA_21 nSTAND3 nSTAND1 AAA_22 AAA_25 AAA_33 Viral_helicase1 DnaJ_CXXCXGXG AAA_18 NACHT MeaB cobW MMR_HSR1 Zn_ribbon_LapB
Other DBs
NCBI-ProteinID: AVQ70609
LinkDB
Position
779407..782319
AA seq 970 aa
MAQTDSIRIRGARQHNLKNVDLELPRNQLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESL
SAYARQFLGQLDKPDVDAIEGLSPAISIDQKSTSHNPRSSVGTVTEIYDYLRLLFGRAGE
PHCPHCDRNIAPQTIDQMCDRVMELAEKTRFQILAPVIRGKKGTHKQLISSLASQGFARV
RIDGKVVELSEGIELDKKHFHDIEIVIDRLIKKEGLQERLVDSLTTCLKHSDGVAIVEIL
DENNEDNPEVTKEIVFSEKFACPEHGAVMEELSPRLFSFNSPYGACPNCHGLGSLRKFSA
DLVIPDPKQPVYSAIAPWSDKDNSYYLSLLYGLGQALGFEIQTPWQKLTKTQQDIILYGS
KEPIYFEDDYRYDTGRGYYREFAGVINILDRNYQETTSEVIKQRLEKYIVNQTCEVCHGK
RLKPEALSVRLGQYTITDFTRVPIRDCLQRINDCHLTPRQALIGELALKEIKARLQFLID
VGLDYLTLDRPAMTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNSKLLETLQ
RLRDLGNTLIVVEHDEETIRAADYVVDIGPKAGIHGGEIICQGSFKTLLKSKKSITGAYL
SGRKVIETPPQRRHGNGNALVLKNCHQNNLRNIDVTIPLGKLVSITGVSGSGKSTLINEL
LYPALQHHLTRLTPFPKELDKVEGLDAVDKVIVIDQSPIGRTPRSNPATYTGVFDIIREI
FTETIEAKARGYKAGQFSFNVKGGRCEACLGQGVNVIEMNFLPDVYVQCDVCKGARYNRE
TLQVKYKGYSIADVLDMTIEEALKVFENVPRATTRLQTLVDVGLGYCKLGQSAPTLSGGE
AQRVKLAAELSRRATGKTLYLIDEPTTGLSFYDVHHLLDVLQRLVDKGNSIIVIEHNLDV
IRCSDWIIDLGPEGGDKGGELIAVGTPETVAKCEQSYTGHYLAQALLQYPPKKRDNIREE
HRDNKANDQD
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggctcaaactgactcaatccgtatccgtggcgcacgacaacacaatctcaaaaatgtt
gatctcgaattaccccgcaatcagttgattgtttttaccggagtttcgggatcgggcaaa
tcttccctcgctttcgacaccatttttgccgagggacagcgccgctatgtggagtccctc
agcgcctacgcgcggcaatttttaggacaattagataaacccgatgtggatgcgatcgag
ggtttaagtccggctatttccattgaccaaaaatccacttcccacaatccccgctctagt
gtgggaactgttacggaaatttacgattacttgcgtttattgttcggtcgtgctggtgaa
ccccattgtccccattgcgatcgcaatattgccccccaaaccatcgatcaaatgtgcgat
cgagtgatggaattagccgagaaaacccgatttcaaatcttggccccggtaattcgcggc
aaaaaaggcacccataagcaattaatctctagtttggcctcccaaggctttgcccgggtg
cggattgacggcaaggtagtagaattatccgagggcatcgagttagataaaaaacatttt
catgatattgaaattgttatcgatcgcctgatcaaaaaagagggtttacaggaaagatta
gtggattctttaaccacttgtttaaagcattccgatggtgtagcgattgtggaaattctc
gatgagaataacgaagataatcccgaagttaccaaagaaattgtcttttccgagaaattt
gcctgtcccgaacacggggcagttatggaggaattatccccccgtttattctcttttaat
tctccctatggtgcttgtcccaactgtcacggattgggcagtttacggaaattttcggca
gatttagtcattccagacccaaaacaaccagtttattccgctattgccccctggtcagat
aaggataattcctactatctttctctcctctacggtttagggcaagctttaggttttgaa
atccaaaccccttggcagaaactaacaaaaacccagcaagatatcattctctatgggagt
aaagaaccgatatattttgaagatgattaccgttacgatactggccgcggttactatcga
gaatttgcgggagttatcaatatcttagataggaattatcaagaaaccacttcggaagtt
attaaacaaagactagaaaaatatattgttaaccaaacctgcgaagtttgtcacggaaaa
agattaaaaccggaagctttatcggtacgtttaggacaatatacgatcacggattttacc
agagttcccattcgggattgtttgcagagaattaatgattgtcatctaaccccaagacag
gcattaattggagaattggccctgaaagaaatcaaagcgagactacaatttttaatcgat
gtgggattagattatcttaccctcgatcgaccggcgatgactttatctgggggagaatcc
caacgaattcgattagccactcaaatcggttcaggattaacgggagtcttatacgttctc
gatgaacctagcatcggattacaccaaagagataatagtaaactgttagaaaccttgcaa
agattgcgagatttaggtaatactttaatcgtcgtcgaacacgatgaagaaacgattcgg
gcagccgattatgtggtcgatatcggtccgaaagcggggattcatggcggagaaatcatc
tgtcaaggcagttttaaaacccttttaaagtccaaaaaatcgataacaggggcctaccta
tcgggacgcaaagttattgaaactcctccccaaagaaggcatggaaatggtaatgcttta
gttttaaaaaattgccatcaaaataacctaagaaatatcgatgtaacgattcctttagga
aaattagtctcgattacgggagtatctggttcaggcaaatccaccctaattaatgagtta
ttatatccagctttacaacatcatttaacccgtttaactcccttccccaaagagttagat
aaagtggaaggattggacgcggttgacaaagtaattgtcatcgaccaatcaccgatagga
cgcactcctcggtcaaatcctgccacctatacgggggtttttgacattattcgcgagatt
ttcaccgaaaccatcgaagcaaaagctaggggttacaaagcggggcagttttcttttaat
gttaagggaggacgctgtgaagcttgcctaggccaaggggtaaacgtcatcgagatgaat
tttctccccgatgtctatgtgcagtgtgatgtgtgtaaaggagcgcgttacaatcgcgaa
accctacaggttaagtataaagggtattcgatcgccgatgtcttagatatgacgatcgag
gaagcattaaaagtctttgaaaatgtcccccgggccaccaccagattacaaactctcgtg
gatgtgggtttaggatactgtaaactcggtcaaagcgcccccactttatccggtggggaa
gcgcaaagggtgaaattagcggccgaattatcccgacgggccacgggaaaaaccctatat
ttgatcgatgaaccgactacgggtttatctttttatgatgtgcatcatctcttagatgtg
ttacaaagattggtcgataaaggtaattcgattatcgtcatcgaacacaatctcgacgtg
attcgctgtagcgattggattattgatttgggaccggaaggaggggataagggaggagaa
ttaatcgcggtgggaacaccggaaaccgtggctaaatgtgaacaatcctacactggtcat
tatcttgcccaagcattacttcaatatcccccaaaaaagcgggataatattagggaagaa
cacagagataataaagccaatgatcaagattag

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