Microcystis sp. MC19: B5D77_07650
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Entry
B5D77_07650 CDS
T05365
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
miq
Microcystis sp. MC19
Pathway
miq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5D77_07650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miq03019
]
B5D77_07650
03016 Transfer RNA biogenesis [BR:
miq03016
]
B5D77_07650
Enzymes [BR:
miq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B5D77_07650
Messenger RNA biogenesis [BR:
miq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B5D77_07650
Transfer RNA biogenesis [BR:
miq03016
]
Prokaryotic type
tRNA degradation factors
B5D77_07650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
KH_SLS1_2
aRib
KH_2
KH_KhpA-B
EXOSC1
DUF5420
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AVQ71204
LinkDB
All DBs
Position
1513886..1516039
Genome browser
AA seq
717 aa
AA seq
DB search
MEEFDKSISFDGRDIRLKIGLLAPQAGGSVLIQSGETAVLVTATTAKAREGVDFLPLTVD
YEERLYAAGRIPGGFLRREGRPPEKAILTGRLIDRPLRPLFPSWLRDDIQVVATTLSMDE
EVPPDVLAVTGASVAVLLAGIPFQGPMAAVRVGLLGDEFIINPTYKEIHNGELDLVVAGS
PEGVVMIEAGANQLPERDIIEAIDFGYEAVRDLITAQRELIDQLGIPLVTREAPVVNETV
HNFLKEQAKEEIKQILSQFTLSKTERDEKLAAIENRLKETITALPDEDPLKAPTLEEPKL
IGNLFKDLTKKLMRAQIIEDGVRVDGRQLDEVRPISCRVGVLPRRVHGSGLFNRGLTQVL
SIATLGTPGDAQDLGDDLHPEDEKRYLHHYNFPPFSVGETRPMRSPGRREIGHGALAERA
IVPVLPPQEEFPYVLRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPLKKPVSGAAMGLIK
EGEEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKIPGLSMEVVAKAIEQALPAR
KHILEKMLATLEKPRTELSPHAPRLLTIKIDPDLIGLVIGPGGKTVKGITEQTGTKIDID
DDGTVTISSTDGEQAEKAKRLIYNMTRKLNEGEVYLGRVTRIIQIGAFVEVLPGKEGMIH
ISQLAEGRVGKVEDEVAVGDEVLVKVREIDSKGRLNLTRLGIHPDEAAAARKAATVV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtttgataagtcaatatcctttgatggcagggatattcgactaaaaataggg
cttttagccccccaagctggcggtagcgttctgatccaatcgggagaaacggcagtttta
gtgacagcaaccacagccaaggccagagaaggagtagatttcctgcccttaaccgttgat
tacgaagaaagattatacgccgccgggcgcatcccgggaggatttttgcgtcgtgaaggt
cgtcccccggaaaaagcaattctgaccggtcgtttgattgatcgccccctgcggcctcta
ttccccagttggctacgggatgatattcaggtggtcgctacgaccctctcgatggatgag
gaagtacccccggatgttttggccgttaccggagcctccgtggcggttctgttggcaggg
attcccttccaaggaccgatggcagcggtgcgcgtcggtttactgggggatgaatttatc
atcaatcccacctacaaggaaatccataacggagaattggatctagtggtggccggtagt
cccgaaggggtggtgatgatcgaagcgggagctaatcagttaccagaacgggatattatt
gaggcgatcgattttggttatgaagcggtccgcgacctgatcaccgctcaacgggaattg
atcgatcagttgggtattcccctcgtcacccgagaagcgccggtagtaaacgaaaccgtg
cataatttcctgaaagaacaagctaaagaggaaattaaacagattctctctcagtttacc
ctcagcaaaaccgaacgggatgagaaattagcggcgatcgaaaatcggctcaaggaaact
ataaccgctctccccgatgaagatcccttaaaagctccaacgctggaagaacccaagtta
atcggtaatctcttcaaggatctgaccaaaaaactgatgcgcgcccaaattattgaggat
ggggtgcgggttgatggtcgccaactggacgaagtacgcccgatttcttgccgggtggga
gttttaccccgccgggttcatggtagcggcctgtttaatcgcggtttaacccaagtgctt
tcgatcgccaccctgggcacccccggtgatgctcaggatttaggggacgatctccatccc
gaagatgaaaagcgctatcttcatcactacaattttccacccttttccgtcggtgaaacc
cgtcccatgcgttctcccggccgtcgagaaattggtcacggtgctttagcggaaagagcg
atcgtacctgtccttcccccccaggaggaatttccctatgtgctgcgggtagtgtcggaa
gtcctctcttctaatggttccacctccatgggttccgtgtgcggttccaccctggcgctg
atggatgccggtgttcccctgaaaaaacccgttagcggtgcggccatgggtttaattaaa
gaaggggaagaagtgcggattttgaccgatatccagggtatcgaggattttctgggagat
atggactttaaggtggctggcactgattccggcatcaccgctcttcagatggatatgaaa
atccccggtttaagcatggaagtggtggccaaggcgatcgaacaagctttaccggcccgc
aaacatatcctcgagaagatgttagcaaccctagaaaaaccccgcacggaattatctccc
cacgcaccccggttattgacgatcaagatcgatccggatctgatcgggttagtaatcggg
ccaggtggtaagacggtgaaagggattactgaacagaccggcacgaaaatcgatatcgat
gacgatggtactgtcaccatttcctctaccgatggggaacaggccgaaaaagctaaacga
ctgatctacaatatgacccgcaaactcaatgagggtgaggtttatctcggtcgcgtgact
cgcattatccaaatcggcgcttttgtggaagttttgccggggaaagagggaatgatccat
atttcccaattggccgagggacgcgtcggtaaggtggaggatgaagtggccgtcggggat
gaggtgttagttaaggtacgggagatcgacagtaaaggtcgtctcaatcttacccgtctc
ggtattcatcccgatgaggccgccgctgcccgtaaggctgctactgtagtctag
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