Microcystis sp. MC19: B5D77_08935
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Entry
B5D77_08935 CDS
T05365
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
miq
Microcystis sp. MC19
Pathway
miq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5D77_08935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miq03021
]
B5D77_08935
03400 DNA repair and recombination proteins [BR:
miq03400
]
B5D77_08935
Enzymes [BR:
miq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5D77_08935
Transcription machinery [BR:
miq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5D77_08935
DNA repair and recombination proteins [BR:
miq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5D77_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AVQ71411
UniProt:
A0A2P1UES3
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All DBs
Position
1776625..1778505
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AA seq
626 aa
AA seq
DB search
MKTPTDQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
KIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNAYVVLDPGNAGNLSYKQLLSEDQWLEIEEEIYAEDSE
LVGIEVGIGAEAIQRLLQEINLEEEAERLRTEIVESKGQKRAKLIKRLRVIDNFIATGSQ
AEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSRLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIYQCGLPREMAIELFQPFVIHRLIKLGIVNNIKAAKKMIQRGDANVWHVLD
EVITGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHIPLS
LEAQSEARLLMLACHNILSPATGRPIVAPSQDMVLGCYYLTAENPKAQKGGGRYFASMDD
AIRAFDQGLVDLHASVWLRLPVGEKVKTNKPDEEVLETETLPDGSIWKYYRERKTREKDG
EIISQYVRTTVGRIIYNKTILEALVV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagactccaacagatcaaagatttgattacgtcaaaatcggtttagcgtcccccgag
agaattcggcaatggggagaaagaactctacctaacggtcaagtcgtcggagaagtaacc
aaaccagaaacgatcaactatcggactctcaaaccggaaatggatgggttattctgcgag
aaaatttttggcccctccaaagactgggaatgttggtgcggtaaatacaaacgcgtccgt
caccgggggattgtctgtgaacgttgcggggtagaagtcaccgagtcccgggtacgtcgt
catcgcatgggttttatcaaattagctgcccccgtcacccacgtttggtatctcaaaggt
attcccagttatctcagtatcctgctcgatatgcccctgcgggacgtggagcagatcgtc
tattttaatgcctatgtggttctcgatccgggtaacgcgggcaatcttagttataaacaa
ctcctcagcgaagatcaatggttagagatcgaagaagaaatctacgcggaggattcggaa
ttagtcggcattgaagtgggtatcggggccgaggctatccaaagactcttacaggaaatt
aacctggaagaagaagcggaaagactgcggacggaaattgtcgaaagtaaagggcaaaaa
cgggcaaaattaattaaacgtctccgggtaatcgataactttatcgccacgggttctcag
gcagaatggatggttttaagcgtaattcccgtgattcctcccgatttacgcccgatggtg
cagttggacggcggccgttttgccacctctgacctgaacgatctctaccgtcgggtgatt
aaccgcaataaccgtttatcccgtctgcaagaaattctcgccccggaaattatcgtccgc
aacgaaaaacggatgttacaggaggccgtcgatgctttaattgataacggtcgtcgcggt
cgcacggtggtgggggccaataatcgcgccctgaagtctttatcggatattatcgagggt
aaacaggggcgtttccgtcaaaatctcctcggtaaacgggttgactattcgggacgttcg
gttatcgttgtcggtccgaaattgaagatctatcaatgcggtttaccccgggaaatggcg
atcgaattgttccaacccttcgttatccatcgtttaattaaattaggcatcgtcaataat
atcaaggcagccaagaaaatgatccaacggggggatgccaatgtttggcacgtcttggat
gaagtaatcacgggacacccggtgatgttaaaccgcgcccccaccctgcaccgtttgggc
attcaagcgtttgaaccgatactggtggagggccgggcgattcagttacatcccctcgtc
tgtcccgcttttaacgctgactttgacggggaccaaatggccgtacatattcccctctcc
ctggaggcacaatcggaagcgcgcttattgatgttggcctgtcataatattctctcaccg
gcgaccggtcgcccgattgttgccccttctcaggatatggttttgggttgttattatctc
acggccgaaaatcccaaggcccaaaagggtggaggtcgttatttcgccagcatggatgac
gctattcgcgcttttgatcagggattggtggatctgcacgcttctgtgtggttgcgttta
ccagtcggagaaaaggtgaaaaccaataaacccgatgaggaagtcctggaaacggaaact
ctccccgatggcagcatctggaaatattatcgggagcgcaaaacccgggagaaggatggt
gagataatttctcagtatgtgcgtactactgtagggcgaattatctacaataagacgatt
ctagaagctttggtggtctag
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