Microcystis sp. MC19: B5D77_09480
Help
Entry
B5D77_09480 CDS
T05365
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
miq
Microcystis sp. MC19
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
miq03016
]
B5D77_09480
Enzymes [BR:
miq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
B5D77_09480
Transfer RNA biogenesis [BR:
miq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
B5D77_09480
Prokaryotic type
tRNA splicing ligases
B5D77_09480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
RNA_pol_Rpb1_4
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AVQ71505
LinkDB
All DBs
Position
complement(1892834..1894015)
Genome browser
AA seq
393 aa
AA seq
DB search
MTYETLQLSTPTPILSWAGHELGPQETQMAKNVASLPFVYKHISLMPDVHLGKGALVGSV
IATKDAVIPAAVGVDIGCGMAALKMPFTGEQLQGKLKKIRLDVEANIPVGFAENKEVDRE
VTKWPKWAEFKQIHRGVQNLEKKALKQMGSLGGGNHFIEICLDTDNQVWLMLHSGSRGIG
NQLAQCHIDTAKELAKLAEGKLPDLDLAYFVAGTEEFAAYWHDLQWAQEYARYNREIMMA
RFKRIVEKHLAGGKPTKPLLVVNCHHNYAEKEIHFGEEVYVTRKGAVRARETDYGIIPGS
MGAQSYIVKGKGEHNSFCSCSHGAGRLMSRNLAKKIFTLDDLIAQTEGVECRKDEGVIDE
IPGAYKPIQQVMNQQADLVEIVATLKQVMCVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacttacgaaactctgcaactttccacaccgacaccgattttatcttgggcaggccat
gaattgggaccccaagagacccaaatggccaaaaatgtcgcttccctcccttttgtttat
aaacacatttctttaatgcccgatgttcacttgggtaaaggtgctttagtcggttcggtg
attgccaccaaagatgccgtaattcccgccgccgtcggagtggatatcggttgcggcatg
gctgccctaaaaatgccttttactggtgaacaattgcagggaaaacttaaaaaaattcgc
ctcgatgtggaggcgaatattcccgtcggttttgcggaaaataaagaagtggatcgggaa
gtaactaaatggccaaaatgggcggaatttaaacagattcatcgaggcgtacaaaaccta
gagaaaaaagcccttaaacaaatgggttctctggggggtggcaatcactttatcgaaatt
tgtttagatacagacaatcaagtttggttaatgctccattccggttctagaggtattggt
aatcaactggcccaatgtcatattgatacggccaaagagttagccaaactagcagaaggt
aaattacccgacctcgatctggcctactttgtcgccggtacagaagaatttgccgcctac
tggcatgacctacaatgggcccaggaatatgcccgttataatcgggaaattatgatggct
agattcaaacgcattgttgaaaaacatctagcgggaggcaaaccaactaaacccctctta
gtagttaattgtcatcacaattatgctgaaaaagaaattcattttggcgaggaggtttat
gtcacccgcaaaggagcagtccgcgctagagaaaccgattatggtattatccccggttcc
atgggagcgcaatcttatattgttaaaggcaagggagaacataatagcttctgttcctgt
tcccacggggccgggcgcttgatgtcgagaaatctggctaaaaaaatctttactcttgat
gatttaatcgcccaaaccgaaggggttgaatgccgcaaggatgagggcgttattgatgag
attccgggagcttataaaccgatccaacaggtgatgaatcaacaggctgatctagtggaa
attgtcgccactctcaagcaggtgatgtgtgtcaaaggttaa
DBGET
integrated database retrieval system
