Microcystis sp. MC19: B5D77_21240
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Entry
B5D77_21240 CDS
T05365
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
miq
Microcystis sp. MC19
Pathway
miq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5D77_21240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miq03019
]
B5D77_21240
03009 Ribosome biogenesis [BR:
miq03009
]
B5D77_21240
Enzymes [BR:
miq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5D77_21240
Messenger RNA biogenesis [BR:
miq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5D77_21240
Ribosome biogenesis [BR:
miq03009
]
Prokaryotic type
rRNA helicases
B5D77_21240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AVQ73497
UniProt:
A0A2P1UKQ8
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All DBs
Position
complement(4233616..4235055)
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AA seq
479 aa
AA seq
DB search
MTTGFNNLGLSDSRLQHLETLGFTTPTEIQTKAIPLLLEGHDMVGMSQTGTGKTAAYSLP
LLERMDTKNPNVQALILTPTRELAQQVASAIKDFSDDRRLFILTVCGGQSMERQIRSLEK
GVQIVVGTPGRVIDLLDRKKLHLESLNWVVLDEADEMLSMGFIDDVKKILQASPSTRQTA
CFSATMPREIRDLIANFLKSPVSVTVSQPQAAPAKIEQKIYLIPRGWTKLKVLQPLLEIE
PLESAIIFVRTKQTAAELTSKLQEAGQTVDEYHGNLSQVQRERLVQRFREGKIKLVVATD
IAARGLDVENLSHVINYDLPDNAETYIHRIGRTGRAGKTGTAISLVEPIDRRLLRQIEQR
LRQRLESSPIPSRTEVEAKRLAKLQNQLKEALSGERMASFLPLVRDLSEEYDPQAIAAAA
LQMIYDQNCPQWMKTDWEVPAAASSKPVINKTPRSGGNKYPSKSNNRPSLDKKIVFQER
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggtttcaacaatttaggtttatccgatagccgtcttcaacacctagaaacg
cttggattcaccacccccaccgaaattcaaaccaaagccatccctctccttctagaaggg
catgacatggtaggaatgtcgcaaacgggaaccggcaaaaccgccgcctattccctgcct
ttactggaacgcatggacaccaaaaatcctaacgttcaagctttaatcctcactcccacc
cgggaattagcccaacaggtggccagcgccatcaaggatttctctgatgaccgtcgtctc
tttatcctgacagtctgtggtggtcaatccatggaacgtcagatccgcagtctggaaaaa
ggtgtccagattgtggttgggactccgggccgggtaatcgatctgctcgatcgcaaaaaa
ctccatctagaatccctaaactgggtagtcctcgatgaagcggacgaaatgctcagtatg
ggttttatcgatgatgttaagaaaattctgcaagcatccccctccacccgtcaaaccgcc
tgtttctcggcaactatgccccgggaaatccgcgatttaatcgctaatttcttgaaatct
cccgtttctgtgacggtttctcaaccccaggccgctcctgctaagatcgagcagaaaatt
tatctgatccctcgcggttggacgaaattaaaagtcctgcaacccctgttagagatcgaa
cccctagaatcggcgattattttcgtccgcaccaagcaaaccgcggccgaattaaccagc
aaactgcaagaagcggggcaaacggtggatgaataccacggtaacttaagccaagtgcaa
cgggaacgactggtgcaacgtttccgcgagggcaaaattaaattagtggtagccacagat
atcgcggcccgcggtctagatgtggaaaatctcagccacgttattaactatgatctgcca
gataatgccgaaacctatattcaccgcattggccgcaccggccgcgctggtaaaacagga
actgctatatccttagtagaaccgatcgatcggcgtttgttgcgtcagattgaacagcgt
ctgcgtcaacgtctggaatctagtcccattcctagtcggaccgaagtagaagcaaaacgt
ctggccaagctgcaaaatcagctaaaagaggctttatcgggggaacggatggcttctttc
ttgcctttagtgcgggatttaagtgaagaatacgatccccaagcgatcgcggctgctgcc
ctgcaaatgatctacgatcaaaattgtccccagtggatgaaaaccgattgggaagttccc
gcagcggccagcagtaaacctgtgattaataaaactccccgcagtggtggtaataagtat
ccctctaagtcgaataaccgtccttccctggacaaaaaaatcgtctttcaagaacgttaa
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