Microcystis sp. MC19: B5D77_24645
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Entry
B5D77_24645 CDS
T05365
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
miq
Microcystis sp. MC19
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
miq03016
]
B5D77_24645
Enzymes [BR:
miq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B5D77_24645
Transfer RNA biogenesis [BR:
miq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B5D77_24645
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
YnaL
Sharpin_PH
WipA_N
Motif
Other DBs
NCBI-ProteinID:
AVQ74054
UniProt:
A0A2P1UMA8
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All DBs
Position
4887455..4889470
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AA seq
671 aa
AA seq
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MEKGTLVEFRVQGERRLGVIDRPEGKKDWIVIDQGGNPHKLRPQRFDYIVKGGPSNYREI
GNFLREVQPYLDPSGLEVAWELLAGENQLVTPETMAEILFSDRGPQFCYAAHCLLSDDKV
YFKNKGDGYEARSENQVEEIKHQLEVEQQRQREKSQFLQRLQQALAGETVEWSESDRIRL
ESLEKFILQPEQKYPAAMDILSLLGRSQTPEAAFELLVDLKWWSSHENLFLRRSSYPVQF
SKKVLDVARLNLLNPPADADVNNRLDLTHQKIYTIDDESTEEIDDGLSVEILADGGHRLW
IHIADPSRLVCPDDELDLEARRRSTSLYLPTGMVPMFPLELAAGPMSLVQGKLCPALSFG
VILDETGAIADYRIYPSTIKPTYRLTYEDVDEMLHLDLQHEPEVRILNRWAKQRHAWRKS
QGSINIQMPESSIKVKDNDEIIVELQEVSPSRQLVAEMMILAGEIAGRYCQEHEIPVPFR
GQPQPELPPDEELILLPAGPVRSCALRRCMPRSEMTTIPNRHASLGLNTYSQVTSPIRRY
TDLLTHFQLKAHLRGDQLPFTRDRMQEILYSVASSAQEATSVERQTNRYWSLEFLRRQGD
QVWQALVLRWLREEENLGLILLEELGLELPHRFERSVSLGDRFQVQVSRADPHRDEIRFR
ELSGFVSSQAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggaacgctggtagaatttcgagtgcaaggagaaaggcgcttaggggtgatc
gatcgcccagaaggtaaaaaagattggatcgtcatcgatcaggggggaaacccgcataaa
ctgcgtccccaacgcttcgattacattgtcaaaggaggtccgtccaactatagggagatc
ggcaattttctgcgagaagtccaaccctatctagatcctagtggtttagaagtggcctgg
gaattattagccggggaaaatcagttagtcactcccgaaaccatggccgagatactcttt
tccgatcgtggtccgcagttttgctatgcagcccattgtctcttgagtgatgataaggtt
tattttaaaaataaaggggatggttacgaggcccgctcggaaaatcaggtagaggaaatc
aaacaccagctagaggtggaacaacagcgtcaacgggaaaaaagccaatttctccaacgt
ctccaacaggccctggccggtgaaacggtagaatggtcagaaagcgatcgaattcgtctg
gaatctctagaaaaatttatcctccaacccgaacaaaaatatccggcagccatggacata
ctctcgctgctaggccgttcccaaacccccgaggctgcttttgaattgttagtcgatttg
aaatggtggagtagtcacgaaaaccttttcctgcgacgcagttcctaccccgttcaattc
tcgaaaaaggtacttgatgtggcgcgtcttaatttactcaatccccctgcggatgcggat
gtcaacaatcgtctcgatttaacccaccaaaaaatttataccatcgacgatgaaagtacc
gaggaaatcgatgacggattatcggtagaaattcttgcagatggtggtcatcgtctctgg
attcatattgccgatcctagtcgtttagtgtgtcccgatgatgaattagacctagaagcg
cgtcgtcgcagtaccagtctctatcttcccacgggaatggttccgatgtttcccctagaa
ttggccgcaggtccaatgagtttggtacagggtaaactttgtcctgccttgagttttggg
gtaatcctcgatgaaacgggagcgatcgccgattatcggatctatcctagtacaattaaa
cccacctatcgcctcacctacgaagatgtggacgaaatgttacatctggatctgcagcat
gaaccggaagtaaggattctcaaccgttgggccaaacaacgccacgcctggcgcaaatct
cagggatcgattaacatccaaatgccagaatcatccattaaggtgaaggataacgacgaa
attatcgtagaattgcaggaagtttccccatctcggcaattagtggcggaaatgatgatt
ttagctggagaaatcgccggtcgctactgtcaggaacacgagatccccgtgcctttccgc
ggacaaccacaaccggaattaccccccgatgaggagttaattttactacctgcgggccct
gtgcgttcctgtgccttgcgtcgctgtatgccgcgcagtgagatgacgacgattcctaac
cgtcatgctagtctgggattgaatacctattcccaagtaacttcgccaattcgccgttat
actgaccttttgacccattttcaactaaaagcccatctccggggcgatcaactgcctttt
acccgggatagaatgcaggaaattctctatagtgtcgctagttcggcccaagaggccacc
tccgtggaacgacaaactaatcgttattggagtttggaatttctgcgacgacagggagat
caagtctggcaagctttggtgttgcgctggctgcgggaagaagaaaatttaggcttgatt
ttattggaggaattggggttagaattaccccatcgttttgagcgttcggtatctttaggc
gatcgctttcaagtacaagttagtcgcgccgatccccaccgcgatgagatccgttttcgc
gagttatcgggttttgtctcctcccaagcaagttaa
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