Mycobacterium paraintracellulare: OCQ_09360
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Entry
OCQ_09360 CDS
T01755
Name
(GenBank) ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mir
Mycobacterium paraintracellulare
Pathway
mir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OCQ_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mir03400
]
OCQ_09360
DNA repair and recombination proteins [BR:
mir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OCQ_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
AFC52449
LinkDB
All DBs
Position
complement(923742..924671)
Genome browser
AA seq
309 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYSATQDHDIKFHQVHAKDNGRIRYQRVCEVDGEVVEYRDI
ARAYESDDGQMVIITDDDIATLPEERSREIEVLEFVPASDVDPMLFDRSYFLEPDSKSSK
SYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKRDVMVIHTLLWPDEIRDPDFPI
LDKKVEVKPAELKMAGQVVDSMAEEFNPDRYHDDYQEQLHELVQAKLEGGEAFTTEEQPK
ELDETEDVSDLLAKLEASVKARSGGGNGKAAEKKALAKKSAAKKTAAKKAPAKKTAAKKT
PAKKAASKS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccatctggaagggttccatcgcgttcgggctggtgaacgtcccggtcaaggtg
tacagcgccacccaggaccacgacatcaagttccaccaggtgcacgccaaggacaacggc
cgcatccgataccagcgcgtgtgcgaggtggacggcgaagtcgtcgaataccgtgacatc
gcccgggcctacgaatccgatgacggccagatggtcatcatcaccgacgacgacatcgcc
acgctgcccgaggaacgcagccgcgagatcgaagtgctggagttcgtgccggccagcgat
gtggatccgatgctgttcgaccgcagctattttttggagcccgactccaaatcgtcgaaa
tcctatgtgctgctggccaagacgcttgcggagacggaccggatggcgatcgtgcacttc
acgctgcgcaacaagacccggctggcggcgttgcgggtcaaggacttcggcaagcgcgac
gtgatggtcatccatacgttgttgtggcccgacgagattcgtgatccggacttcccgatc
ctcgacaagaaggttgaggtcaaacccgccgagctcaaaatggcggggcaggtggttgat
tcgatggccgaggagttcaaccccgaccgctaccacgacgactaccaggagcagctgcac
gagctggtccaagccaaactcgaaggcggagaggcgtttaccaccgaggagcagcccaag
gagctggatgagaccgaagacgtctccgatctgctggccaagctggaggccagcgtgaag
gcgcgctccggtggaggcaacggcaaggcagcggagaaaaaggcgctcgcgaaaaagagc
gcagcgaagaagaccgccgccaagaaggcacccgcgaaaaagaccgccgccaagaagact
ccggccaagaaagcggcctcgaagtcctga
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