Mycobacterium paraintracellulare: OCQ_33360
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Entry
OCQ_33360 CDS
T01755
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mir
Mycobacterium paraintracellulare
Pathway
mir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCQ_33360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mir03400
]
OCQ_33360
Enzymes [BR:
mir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCQ_33360
DNA repair and recombination proteins [BR:
mir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCQ_33360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AFC54848
LinkDB
All DBs
Position
complement(3592369..3594351)
Genome browser
AA seq
660 aa
AA seq
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MEPIARVLPMLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFVLERRADTDH
PGKLGWLDRVVSAEPVLTPEIRRLVDAVAARYAGTRPDVLRLAVPARHARVEREPAVSRD
PPGPAIPDPVDPAGWDGYGRGAQFLAALAESRAARAVWQALPGEPWTDRFAEAAAQTVRA
GRSALAIVPDQRDLDALWRAATTRIDEGSVVALSAGLGPAARYRRWLAALRGTARLVIGT
RSAVFAPLSDLGLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEA
HALVRSGWAHDIVAARPVVRARTPRVSALDDTGYADERDPAARTARIPSIALRAARSALQ
AGTPVLVQVPRRGYVPSLACARCRTIARCRHCTGPLSLQEGGAALLCRWCGRIDPTRRCA
RCGSDAVRAVVVGARRTAEELGRAFPGTAVITSSGDGVVPEVAPGPALVVATPGAEPRAS
GGYGAALLLDPWALLGRQDLRAAEDALWRWMSAAALVRARGDGGVVLVIAESSLPTVQSL
IRWDPVGHAEAELTARAEVGLPPSVHMAAIDGTPDAVTALLGEVRLAELEADLLGPVHLP
TGVRRPAGTPAGVAVTRMLVRVPRRQGLALAAALRRGVGVLSARQTHEPARVQIDPLHIG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtggaacccatcgcccgcgtgctgccgatgctgtccgtgccgcacctggaccgcgagttc
gactatctggtgtcggccgagcagtccgacgatgcccagcccggggtgcgggtccgggtg
cgtttccatggccggctggtcgacgggttcgtgctggagcgccgcgccgacaccgaccac
ccgggcaagctgggctggctggaccgcgtcgtgtcggccgaaccggtgctcacccccgag
atccgccggctggtcgacgccgtggccgcgcgctacgcgggcacccgtcccgacgtcttg
cggctggccgtgccggcccgccacgccagggtggagcgggagcccgccgtgagccgggac
ccgccgggcccggcgatcccggaccccgtcgaccccgcgggctgggacggctacgggcgg
ggcgctcaattccttgccgccctggccgagtcgcgggccgcgcgggccgtctggcaggcg
ctgccgggcgagccgtggaccgaccgattcgccgaggccgccgcccaaacggtgcgggcc
ggccggtccgcgctggcgatcgttcccgaccagcgcgacctggacgccctgtggcgggcg
gcgacgacacggatcgacgagggcagcgtggtcgccctgtcggcgggcctgggccccgcg
gcccggtatcgccgctggctggcggcgctgcggggcaccgcgcggctggtgatcggaacc
cgcagcgcggtgttcgcgccgctgagcgacctgggcctcgtcatggtgtgggccgacgcc
gacgacagcctggccgagccgcgggccccgtatccgcacgcccgcgaggtggcgatgctg
cgcgcgcaccaggcccggtgcgcggccctgatcggcggctacgcgcgcaccgcggaggcc
cacgcgctggtgcgcagcggatgggcgcacgacatcgtcgcggcgcggcccgtggtgcgc
gcccgcaccccgcgggtgagcgcgctcgacgacaccggctacgccgacgagcgcgacccg
gcggcccgcacggcgcgcattccctcgatcgcgctgcgcgcggcccgctcggcgttgcag
gccgggactccggtactggtgcaggtgccgcggcgcggatacgtcccgtcgctggcgtgt
gcgcgctgccgcaccatcgcccggtgccggcactgcaccgggccgctgtcgctgcaggag
gggggcgccgcgctgctctgccgctggtgcgggcggatcgacccgacgcgccggtgcgcg
cgctgcggttcggacgcggtgcgcgccgtggtcgtcggggcccgccgcaccgccgaagag
ctcggccgcgcgtttccgggcacggcggtgatcacctcgtcgggcgacggcgtcgtgccc
gaggtcgcgcccggaccggccctggtggtcgccaccccgggggccgaaccgcgcgcgtcc
ggtggttacggggcggcgctgctgttggacccgtgggcgctgctgggccggcaggatctg
cgcgccgccgaggacgcgttgtggcgctggatgagcgccgccgcgctggtgcgtgctcgc
ggcgacggcggcgtggtgctggtgatcgccgaatcatcgcttcccacagtgcaatcgctg
atccgctgggatccggtggggcacgcggaagcggaactgaccgcccgcgccgaggtgggc
ctgccgccgagcgtgcacatggcggccatcgacggaacgcccgacgcggtgaccgcgctg
ctcggcgaggtccggctcgccgaactggaagccgacctgctcgggccggtgcacctgccg
accggcgtgcgccgcccggccggaaccccggcgggcgtggcggtgacgagaatgctggtg
cgcgtgccccgccggcagggcctggcgctggcggccgcgctgcgccgcggcgtcggtgtg
ctcagcgcccggcaaacccatgagcccgcccgggtccagatcgatccgctgcacatcggc
tag
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