KEGG   Mycobacterium paraintracellulare: OCQ_33360
Entry
OCQ_33360         CDS       T01755                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
mir  Mycobacterium paraintracellulare
Pathway
mir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OCQ_33360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mir03400]
    OCQ_33360
Enzymes [BR:mir01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OCQ_33360
DNA repair and recombination proteins [BR:mir03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OCQ_33360
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: AFC54848
LinkDB
Position
complement(3592369..3594351)
AA seq 660 aa
MEPIARVLPMLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFVLERRADTDH
PGKLGWLDRVVSAEPVLTPEIRRLVDAVAARYAGTRPDVLRLAVPARHARVEREPAVSRD
PPGPAIPDPVDPAGWDGYGRGAQFLAALAESRAARAVWQALPGEPWTDRFAEAAAQTVRA
GRSALAIVPDQRDLDALWRAATTRIDEGSVVALSAGLGPAARYRRWLAALRGTARLVIGT
RSAVFAPLSDLGLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEA
HALVRSGWAHDIVAARPVVRARTPRVSALDDTGYADERDPAARTARIPSIALRAARSALQ
AGTPVLVQVPRRGYVPSLACARCRTIARCRHCTGPLSLQEGGAALLCRWCGRIDPTRRCA
RCGSDAVRAVVVGARRTAEELGRAFPGTAVITSSGDGVVPEVAPGPALVVATPGAEPRAS
GGYGAALLLDPWALLGRQDLRAAEDALWRWMSAAALVRARGDGGVVLVIAESSLPTVQSL
IRWDPVGHAEAELTARAEVGLPPSVHMAAIDGTPDAVTALLGEVRLAELEADLLGPVHLP
TGVRRPAGTPAGVAVTRMLVRVPRRQGLALAAALRRGVGVLSARQTHEPARVQIDPLHIG
NT seq 1983 nt   +upstreamnt  +downstreamnt
gtggaacccatcgcccgcgtgctgccgatgctgtccgtgccgcacctggaccgcgagttc
gactatctggtgtcggccgagcagtccgacgatgcccagcccggggtgcgggtccgggtg
cgtttccatggccggctggtcgacgggttcgtgctggagcgccgcgccgacaccgaccac
ccgggcaagctgggctggctggaccgcgtcgtgtcggccgaaccggtgctcacccccgag
atccgccggctggtcgacgccgtggccgcgcgctacgcgggcacccgtcccgacgtcttg
cggctggccgtgccggcccgccacgccagggtggagcgggagcccgccgtgagccgggac
ccgccgggcccggcgatcccggaccccgtcgaccccgcgggctgggacggctacgggcgg
ggcgctcaattccttgccgccctggccgagtcgcgggccgcgcgggccgtctggcaggcg
ctgccgggcgagccgtggaccgaccgattcgccgaggccgccgcccaaacggtgcgggcc
ggccggtccgcgctggcgatcgttcccgaccagcgcgacctggacgccctgtggcgggcg
gcgacgacacggatcgacgagggcagcgtggtcgccctgtcggcgggcctgggccccgcg
gcccggtatcgccgctggctggcggcgctgcggggcaccgcgcggctggtgatcggaacc
cgcagcgcggtgttcgcgccgctgagcgacctgggcctcgtcatggtgtgggccgacgcc
gacgacagcctggccgagccgcgggccccgtatccgcacgcccgcgaggtggcgatgctg
cgcgcgcaccaggcccggtgcgcggccctgatcggcggctacgcgcgcaccgcggaggcc
cacgcgctggtgcgcagcggatgggcgcacgacatcgtcgcggcgcggcccgtggtgcgc
gcccgcaccccgcgggtgagcgcgctcgacgacaccggctacgccgacgagcgcgacccg
gcggcccgcacggcgcgcattccctcgatcgcgctgcgcgcggcccgctcggcgttgcag
gccgggactccggtactggtgcaggtgccgcggcgcggatacgtcccgtcgctggcgtgt
gcgcgctgccgcaccatcgcccggtgccggcactgcaccgggccgctgtcgctgcaggag
gggggcgccgcgctgctctgccgctggtgcgggcggatcgacccgacgcgccggtgcgcg
cgctgcggttcggacgcggtgcgcgccgtggtcgtcggggcccgccgcaccgccgaagag
ctcggccgcgcgtttccgggcacggcggtgatcacctcgtcgggcgacggcgtcgtgccc
gaggtcgcgcccggaccggccctggtggtcgccaccccgggggccgaaccgcgcgcgtcc
ggtggttacggggcggcgctgctgttggacccgtgggcgctgctgggccggcaggatctg
cgcgccgccgaggacgcgttgtggcgctggatgagcgccgccgcgctggtgcgtgctcgc
ggcgacggcggcgtggtgctggtgatcgccgaatcatcgcttcccacagtgcaatcgctg
atccgctgggatccggtggggcacgcggaagcggaactgaccgcccgcgccgaggtgggc
ctgccgccgagcgtgcacatggcggccatcgacggaacgcccgacgcggtgaccgcgctg
ctcggcgaggtccggctcgccgaactggaagccgacctgctcgggccggtgcacctgccg
accggcgtgcgccgcccggccggaaccccggcgggcgtggcggtgacgagaatgctggtg
cgcgtgccccgccggcagggcctggcgctggcggccgcgctgcgccgcggcgtcggtgtg
ctcagcgcccggcaaacccatgagcccgcccgggtccagatcgatccgctgcacatcggc
tag

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