Mycobacterium paraintracellulare: OCQ_34230
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Entry
OCQ_34230 CDS
T01755
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mir
Mycobacterium paraintracellulare
Pathway
mir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCQ_34230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mir03400
]
OCQ_34230
Enzymes [BR:
mir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCQ_34230
DNA repair and recombination proteins [BR:
mir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCQ_34230
RecFOR pathway proteins
OCQ_34230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
Mg_chelatase
AAA_16
RNA_helicase
nSTAND3
AAA_14
IstB_IS21
AAA_3
Zeta_toxin
HTH_AsnC-type
AAA_18
NTPase_1
AAA_33
Resolvase
TsaE
DUF815
Rad17
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFC54935
LinkDB
All DBs
Position
complement(3681549..3682604)
Genome browser
AA seq
351 aa
AA seq
DB search
MTPAEEDWSDRDVSGALAPGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTP
DHILLSGPPGLGKTSLAMIIAAELGSSLRLTSGPALERAGDLAAMLSNLVEHDVLFIDEI
HRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRF
GFTAHMDFYEPAELERVLARSAGILGIELGGDAAEEIARRSRGTPRIANRLLRRVRDFAE
VRADGVITRDVAKSALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAT
TVEEVCEPFLVRAGMVARTPRGRVATAQAWTHLGMAPPAGAAGLGQPGLFE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgctgaggaagactggtcggaccgcgacgtctccggcgcgctggcgcccggc
gagggcgacatcgacgtcagcctgcggccgcgctcgctgcgggagttcatcggccagccg
cgggtgcgcgaacagctgcagctcgtcatcgagggcgccaaaaaccgcggcggcacaccg
gatcacatcctgctgtccgggccgccggggctgggcaagacgtcgctggccatgatcatc
gcggccgagctcggctcctcgctgcggctgacgtccggccccgcgctggaacgcgccggc
gacctggcggccatgctgtccaacctggtcgagcacgacgtgttgttcatcgacgagatc
caccgcatcgcgcggcccgccgaggaaatgctctacctggccatggaggacttccgggtc
gacgtggtcgtcggcaaggggccgggcgcgacgtcgatcccgctggaggtggcgccgttc
accctggtcggcgccaccacccggtccggcgcgctgaccggcccgctgcgcgatcgcttc
ggcttcaccgcgcacatggatttctacgagcccgccgagctggagcgggtgctggcccgc
tccgccgggatcctgggcatcgaactcggcggcgacgcggccgaggagatcgcccgccgc
tcgcggggcacgccgcggatcgccaaccggctattgcgccgggtgcgggacttcgccgag
gtgcgcgccgacggtgtgatcacccgcgacgtcgccaagtccgcgctggcggtctacgac
gtcgacgaactgggactggaccggctggaccgggccgtgctctcggcgctgacccgcagc
ttcgggggcggcccggtcggggtgtcgacgctggcggtggcggtcggcgaggaggcgacc
accgtcgaggaggtgtgcgagccgttcctggtgcgcgccggcatggtcgcccggaccccg
cgcggccgggtggccaccgcccaggcgtggacgcacctgggcatggcgccgccggccggg
gcggccggtctcgggcagcccggcctgttcgagtag
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