KEGG   Mycobacterium paraintracellulare: OCQ_37760
Entry
OCQ_37760         CDS       T01755                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
mir  Mycobacterium paraintracellulare
Brite
KEGG Orthology (KO) [BR:mir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mir03032]
    OCQ_37760
   03036 Chromosome and associated proteins [BR:mir03036]
    OCQ_37760
   03400 DNA repair and recombination proteins [BR:mir03400]
    OCQ_37760
DNA replication proteins [BR:mir03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    OCQ_37760
Chromosome and associated proteins [BR:mir03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    OCQ_37760
DNA repair and recombination proteins [BR:mir03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      OCQ_37760
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Extensin_1 HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AFC55288
LinkDB
Position
complement(4009209..4009832)
AA seq 207 aa
MLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGET
VKVKPTSVPAFRPGAQFKAVVSGAQRLPSDGPAVKRGVVGGTGAAKKTAAKKAPAKKAAA
KKAPAKKAAAKKAPAKKAAVKKAPAKKAAVKKAPARKAATKAPAKKTAAKKAPARKAATK
APAKKAASKSTARKAPAKKTTARRGRR
NT seq 624 nt   +upstreamnt  +downstreamnt
gtgctcacacagaaattgaacacggaccgtcggcaggcgaccgcagcggtcgagaacgtt
gtcgacaccattgtgcgtgcggtacacaagggcgacagcgtcaccattaccgggttcggt
gtgttcgaacagcggcgccgcgcagcgcgcgtggctcgcaacccgcgtaccggtgagacg
gtgaaggtgaagccgacttccgtccccgcgttccgtcccggtgcccaattcaaagcggtt
gtgtctggcgcacagcgtctcccgtcggacggcccggccgtcaagcgcggtgtggtaggt
ggcacgggcgcggccaagaagaccgcggccaagaaggctcccgccaagaaggctgcggcc
aagaaggctcccgccaagaaggcggcggccaagaaggctcccgccaagaaggccgcagtg
aagaaggctccggccaaaaaggccgcagtgaagaaggctccggcccgcaaggccgcgacc
aaggctccggccaagaagactgcggcaaagaaggctccggcccgcaaggccgcgaccaag
gccccggccaagaaggccgcgagcaagtcgacggcccgcaaggctcccgccaagaagacg
accgcgcgtcgcggccgccgctag

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