Mycobacterium paraintracellulare: OCQ_40500
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Entry
OCQ_40500 CDS
T01755
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mir
Mycobacterium paraintracellulare
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mir03032
]
OCQ_40500
03400 DNA repair and recombination proteins [BR:
mir03400
]
OCQ_40500
Enzymes [BR:
mir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OCQ_40500
DNA replication proteins [BR:
mir03032
]
Prokaryotic type
DNA Topoisomerases
OCQ_40500
DNA repair and recombination proteins [BR:
mir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OCQ_40500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFC55562
LinkDB
All DBs
Position
4271621..4272679
Genome browser
AA seq
352 aa
AA seq
DB search
MMRLRRSVLSKPGIARKRRGKSFSYYEPGGKPVSDPETLQRIKDLVIPPAWKKVWISPHP
NGHIQAVGVDAAGRRQYLYHSAWQAERAEEKFDRVLELSTRLPACRAEIAKDLARHGLTR
KRVLALALRLLDRGYFRAGGEQYAEEHESYGLSTLLCEHVVVRRDAVEFDFPAKSGVRRT
VEIEDPDVVRAVRALMRRPDRTERLLVCRNSSGWIDVRADDLNARFKELAGDDYTVKDLR
TWHGTVLAAAAFADADPAVSGRVAKRVEAAVMKEVAEELGNTPAVARGSYVDPRVVTGYE
QGLTIAAAARRAERAKSPDLAQEILDKATRMLIRRVAKADSANGSSGLRKTA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgcgtcgcagcgtgctgagcaagccgggaatcgcgcgcaagcgtcgcgga
aagagcttctcctactacgagccgggcggcaagccggtttccgatccggaaaccctgcag
cgcatcaaggatctggtcatcccgccggcgtggaagaaggtgtggatctcgccgcatccg
aacggccacatccaggccgtcggcgtcgacgccgccgggcgccggcagtacctctaccac
tccgcgtggcaggccgaacgcgccgaggagaagttcgaccgggtgctggaactttcgacg
cggcttcccgcgtgccgcgccgagatcgccaaagaccttgcgcgccacggcttgacccgc
aagcgcgtgctggcgctcgcgctgcggctgctcgaccgcggttacttccgcgccggcggc
gagcaatacgccgaggagcacgagtcctacgggttgtccaccctgctatgtgagcatgtg
gttgtccggcgtgacgccgtcgaattcgactttccggccaagagcggggttcggcgcacc
gtggaaatcgaggaccccgacgtggtccgcgcggtgcgtgcgctgatgcgcaggcccgac
cgcaccgagcgattgctggtgtgccgcaactcttccgggtggatcgatgtgcgcgccgat
gacctcaacgcccgattcaaggagctggccggcgacgactacaccgtcaaggacctgcga
acgtggcacgggacggtgctggcggccgcggccttcgccgacgccgacccggcggtatcg
ggccgggtggccaagcgcgtcgaggccgccgtgatgaaagaggtcgccgaggagctgggc
aacacgcccgcggtggcgcgcggttcctacgtggatccccgcgtcgtcaccggctatgag
cagggtctgaccatcgccgcggcggcgcgccgcgccgagcgcgccaaatcgcccgacctg
gcgcaggagattctggacaaggccacccgaatgctgatccggcgcgtggccaaggccgac
agcgccaacggatcgtccggcctgcgcaagacggcatga
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