Mycobacterium paraintracellulare: OCQ_43650
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Entry
OCQ_43650 CDS
T01755
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mir
Mycobacterium paraintracellulare
Pathway
mir03018
RNA degradation
mir05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCQ_43650
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
OCQ_43650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mir03019
]
OCQ_43650
03110 Chaperones and folding catalysts [BR:
mir03110
]
OCQ_43650
03029 Mitochondrial biogenesis [BR:
mir03029
]
OCQ_43650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mir04147
]
OCQ_43650
Enzymes [BR:
mir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OCQ_43650
Messenger RNA biogenesis [BR:
mir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OCQ_43650
Chaperones and folding catalysts [BR:
mir03110
]
Heat shock proteins
HSP60 / Chaperonin
OCQ_43650
Mitochondrial biogenesis [BR:
mir03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OCQ_43650
Exosome [BR:
mir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCQ_43650
Exosomal proteins of other body fluids (saliva and urine)
OCQ_43650
Exosomal proteins of breast cancer cells
OCQ_43650
Exosomal proteins of colorectal cancer cells
OCQ_43650
Exosomal proteins of bladder cancer cells
OCQ_43650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
AFC55877
LinkDB
All DBs
Position
complement(4596899..4598521)
Genome browser
AA seq
540 aa
AA seq
DB search
MSKIIEYDETARRAIEAGVNTLADAVRVTLGPRGRHVVLAKAFGGPAVTNDGVTVAREID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVKGGLRLVAAGANPIELGAGIS
KAADAVSEALLASATPVSGKEAIAQVATVSSRDQLLGELVGEAMTKVGTDGVVSVEESST
LSTELEFTEGVGFDKGFLSAYFVTDFDAQQAVLDDPVILLHQEKISSLPDLLPMLEKVAE
SGKPLLIIAEDIEGEPLATLVVNSIRKTLKAVAVKAPFFGDRRKAFLEDLAIVTGGQVIN
PDAGLLLREVGTDVLGSARRVVVSKDDTVIVDGGGAKDAVANRIKQLRAEIESTDSDWDR
EKLQERLAKLAGGVAVIQVGAATETALKERKESVEDAVAAAKAAVEEGIVAGGGSALLQT
RKALQQLRGSLTGDQALGVDVFSEALAAPLYWIATNAGLDGAVAVHKVTELPNGHGLNAD
KLTYGDLIADGVIDPVKVTRSAVLNAASVARMVLTTETAVVDKPAEEADDHGHGHGHHHH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagattattgagtacgacgaaacggcgcgccgcgccatcgaggcgggcgtgaac
acgctcgccgacgcggtacgcgtgacgttgggcccgcgcggccggcatgtggtgctggcc
aaggcattcggcgggcccgcggtcaccaacgacggtgtcaccgtcgcgcgggagatcgac
ctggaagacccgttcgagaacctgggcgcccagctggtgaagtcggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccacggcgactgtgctggcccaggcgctggtcaag
ggcggcctgcgcctggttgcggccggcgccaaccccatcgaactcggtgcgggaatctcc
aaggccgccgacgcggtgtccgaggccctgctggcgtcggccaccccggtctccgggaag
gaagcgatcgcccaggtggcgaccgtgtcgtcgcgcgaccagctcctcggcgagctcgtc
ggcgaggcgatgaccaaggtcggcaccgacggcgtagtcagcgtcgaggaatcctccacg
ctgagcaccgagctcgagttcaccgagggcgtcggcttcgacaagggcttcctgtcggcg
tatttcgtgaccgacttcgatgcccagcaggccgtgctggacgaccccgtgatcctgttg
caccaggagaagatcagctcgctgcccgacctgctgcccatgctggaaaaggtcgccgaa
tccggcaagccgctgctgatcatcgccgaggacatcgagggcgagccgctggcgaccctc
gtggtcaactcgattcgcaagacgctcaaggccgtcgcggtcaaggcgccgttcttcggc
gaccgccgcaaggcgttcctcgaggatctggcgatcgtgacgggcggccaggtgatcaac
cccgacgccggcctgctgctgcgcgaggtcggcacggacgtgctgggctcggcccgccgc
gtggtggtcagcaaggacgacaccgtcatcgtcgacggcggcggcgccaaggacgcggtg
gccaaccgcatcaagcagctgcgcgccgagatcgagtccaccgactccgactgggaccgc
gagaagctgcaggagcggctggccaagctggccggcggtgtcgccgtgatccaggtgggt
gccgccaccgagaccgcgctcaaggaacgcaaggagagcgtcgaggatgccgtcgcggcc
gccaaggccgccgtcgaggagggcatcgtcgcgggcggcggctcggcgttgctgcagacc
cgcaaggcgcttcaacagctgcgcggctcgctgaccggtgatcaagcgctcggcgtcgac
gtcttctccgaggcgctggcggccccgctgtactggatcgccaccaacgccgggctcgac
ggtgcggtggcggtgcacaaggtgaccgagctgcccaacggccacgggctgaacgcggac
aagctcacctacggtgacttgatcgccgacggtgtcatcgacccggtcaaggtcacccgc
tcggcggtgctcaacgcggcgtcggtggcgcggatggtgctgaccaccgagacggcggtc
gtcgacaagccggccgaggaagccgatgaccacggccacggccacggtcatcaccaccac
tag
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integrated database retrieval system
