Mycobacterium paraintracellulare: OCQ_45490
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Entry
OCQ_45490 CDS
T01755
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mir
Mycobacterium paraintracellulare
Pathway
mir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCQ_45490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mir03400
]
OCQ_45490
Enzymes [BR:
mir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OCQ_45490
DNA repair and recombination proteins [BR:
mir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCQ_45490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFC56061
UniProt:
A0ABN6AJ79
LinkDB
All DBs
Position
4766648..4769950
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AA seq
1100 aa
AA seq
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MPLHLHRAERTDLLADGLGALLADPPADPFAPELVVVPARGVERWLSQRLSHVLGRARGG
GVSGGVCAGVSFRSPGSLIAEIAGTADDDPWSPEAMAWPLLEAIDHSLDEPWCRPLATHV
GHFHTGAEAELRRGRRYEVARRLAGLFASYARQRPQLLIDWLGGDPGDLDEDLRWQPELW
RALVSRVAADPPHIRHAKTLARLSEAPSDLPARLSLFGHTRLSRTDSELLAALAIHHELH
LWLPHPSDRLWRALAGTRGAIPRREDTSHRAVGHPLLATLGRDLRELQRGLPADAQTDEY
LPGEARPDTLLGWVQSDIAANAVRPQGRALADDDRSVQIHNCHGPARQVDVLREVLLGLL
ADDPTLEPRDILVMCPDIETYAPLIVADFGLGDVVHGAHPAHQLRVLLADRSLVQTNSLL
AVASQLLGLAGGRVTATEVLNLAQAAPVRARFGFTDDDLEAITRWVRQANIRWGLDQEHR
RPYHVDFVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVPLAGQFAEFVARL
HHVVDSLTGTRTLTEWLATLAGAIASLTRVHESEEWQTGQVQREFAAVLAQAGSRGGTML
RLPDIRALLTRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLGVVD
GDDALARRPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLAELL
DALDVTTPTKVRHRIVIEHPLQPFDVRNVIPGELVPKVPFSFDPTVLRAARAATGEHTEQ
PKFVAAPLPPPPADDVNLADLVGFFKDPVKGFFRALEFTLPYDVDGVQDAMPVDINGLEE
WTVGDRMLGDILRGMSPDDARQAEWRRGTLPPGQLGWRKVTEIRDQAAALALEALRHRQD
HRSAAAYDVDVDLGAGRRLTGTVSPVYDDALVSVTYSRLDGKHLLESWIPLLALAAHDPG
RDWSAVCIGRMRRGRSIRVEGLGPPDGDPVEVLRELVTIYDAGRREPIPLPIKTSYAWAA
ARHGGDDPAAEARRRWKTSDRFPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECDGEDNR
LGAYAARLWLPMLRAERKLI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcatctgcaccgcgccgagcgcaccgatctgttggccgacgggctcggcgct
ctgctggccgatcccccggccgacccgttcgcccccgagctcgtcgtggtcccggcgcgc
ggggtggagcgctggctgagccagcggctgtcgcacgtgctcggtcgggcccgcggcggc
ggggtttccggcggggtgtgcgccggggtttcgttccgcagccccggctcgctgatcgcc
gagatcgccggcaccgccgacgacgatccgtggtcgccggaggccatggcgtggcccctt
ctggaggcgatcgaccactcgctggacgaaccgtggtgccgcccgctggcgacccatgtc
ggtcacttccacaccggcgcggaggccgagctgcgccgggggcgccggtacgaggtggcg
cgccggttggccgggctgttcgcctcctacgcacggcagcgcccgcaactgctgatcgac
tggctgggcggcgacccgggcgatctcgatgaggacctgcgctggcagccggagctgtgg
cgggcgctggtgtcgcgggtcgcggccgatcccccgcacattcgccacgccaagaccctc
gcgcggctgtccgaggcgcccagtgacctgcccgcgcggctgtcgctgttcgggcacacc
cggttgtcgcgcaccgactccgagctgctggccgccctggccatccaccacgagctgcac
ctgtggctgccgcaccccagcgaccggctgtggcgcgcgctggccggcacgcgcggggcg
atcccccgccgcgaggacaccagccaccgcgccgtgggccacccgctgctcgccaccctg
gggcgggacctgcgcgagctgcagcgcggcctgccggcggacgcgcagaccgacgagtac
ctgcccggcgaggcgcgcccggacacgctgctcggctgggtgcagtccgacatcgccgcc
aacgccgtgcggccgcaggggcgcgcgctggccgacgacgaccggtcggtccagatccac
aactgccacggcccggcccgccaggtcgatgtgctgcgcgaggtgctgctcggcctgctg
gccgacgacccgacgctcgaaccgcgcgacatcctggtgatgtgcccggacatcgaaacc
tatgcgccgctgatcgtggccgacttcggcctgggcgacgtggtgcacggcgcgcatccc
gcccaccagctacgggtgctcctggcggatcgctcactggtccagaccaattcgctgctg
gctgtggcctcccaactgctggggctcgccggcggcagggtgacggccaccgaggtgctc
aacctggcacaggccgccccggtgcgcgcccggttcgggttcaccgacgacgatctggag
gccatcacccgctgggtgcggcaggccaacatccggtggggattggaccaggagcaccgg
cggccctaccacgtcgacttcgtgcacaacacctggcgtttcggcatcgaccggatcttg
gccggcgtcgcgatgtccgacgattcgaacgcatggatcgacgcgacgctgccgctcgac
gacgtgagcagcaaccgggtcccgttggccggccagttcgccgaattcgtcgcccggctg
caccacgtggtcgactccctcaccggcacaaggacattgaccgagtggctggccaccctc
gccggcgccatcgcctcgttgacgcgggtgcacgagtccgaggagtggcagaccggtcag
gtgcaacgggagttcgccgcggtcctggcgcaggccgggtcacggggcggcacgatgctg
cgactgcccgacatccgcgcgctgctgacccggcacctcgccgggcgccccacgcgggcc
aacttccgcaccggcacgctgacggtgtgcaccatggtcccgatgcgctcggtcccccac
cgggtggtgtgcctggtcggcctggacgacgggctgttcccgcgtctcggtgtcgtcgac
ggggacgacgcgctggcccgccgcccgatgaccggggaacgcgacatccgttcggaggac
cggcaattgctgctcgacgcgatcggcgccgccaccgagaaactggtgatcacgtacacc
ggcgccaacgaatattcggggcagccgcgcccacccgcggtgccgctggccgaattgctg
gacgccctcgacgtgacgacgccgacgaaggtgcgccaccgcatcgtgatcgagcatccg
ttgcagccgttcgacgttcgcaacgtcatccccggcgaactggtgccgaaggtgccgttc
agtttcgaccccacggtgctgcgcgcggcgcgcgcggccaccggcgaacacaccgaacaa
cccaaattcgttgcggcgccgctgccgcccccgccggccgacgacgtcaacctcgccgac
ctcgtcggcttcttcaaagacccggtgaagggcttcttccgcgccctggaattcacgctg
ccctacgacgtcgacggcgtccaagacgccatgccggtcgacatcaacggcctcgaggag
tggaccgtcggcgaccggatgctgggcgacatcctgcgcgggatgagccccgatgacgcg
cggcaggccgaatggcgccgcggcacactgccccccggccagctgggctggcgcaaggtc
accgagatccgcgaccaggccgccgcgctggcgctcgaggcgctgcggcatcggcaagac
caccgatcggccgccgcctatgacgtcgacgtcgacctgggcgccggtcgccggctcacc
ggcacggtgtcgccggtctacgacgacgccctggtgtcggtgacctattcgaggctggac
ggcaagcacctgctcgaatcgtggattccgttgctggcgttggccgctcacgaccccggc
cgcgactggtcggcggtgtgcatcggccggatgcgccgcggcagaagcatccgggtcgag
gggctggggccaccggacggcgatcccgtcgaggtgctgcgcgagctggtgacgatctac
gacgcgggacggcgggaaccgattccgttgcccatcaagacgtcctacgcgtgggcggcg
gcccggcacggcggcgacgacccggcggccgaggcgcggcgccggtggaagaccagcgac
cgcttcccgggtgaggaccaggcgccggcgcacgtgcgggcgtgggggcgcggcgcgccg
ttggacgatctgatgcagccggtgcggccgggcgaggagtgcgacggcgaggacaaccgg
ctcggcgcgtatgcggcccggctgtggctgccgatgctgcgcgccgagcggaagctcatc
tga
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