Micromonas commoda: MICPUN_100558
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Entry
MICPUN_100558 CDS
T02695
Name
(RefSeq) predicted protein
KO
K03265
peptide chain release factor subunit 1
Organism
mis
Micromonas commoda
Pathway
mis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MICPUN_100558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_100558
03012 Translation factors [BR:
mis03012
]
MICPUN_100558
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MICPUN_100558
Translation factors [BR:
mis03012
]
Eukaryotic type
Release factors
MICPUN_100558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
8243826
NCBI-ProteinID:
XP_002502152
JGI:
MicpuN3_100558
UniProt:
C1E6E3
LinkDB
All DBs
Position
5:join(789531..789564,789759..789775,789914..791188)
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AA seq
441 aa
AA seq
DB search
MADDDNAEEIEMWKVRRLVKGLQEARGNGTSMISLVIPPKGQINLTAKMLADELGTASNI
KSRVNRQSVLAAIGSAQQRLKLYNHVPPNGLVIYCGTVLTDEGKEKKVNMDFEPFKPINT
SLYMCDNKFHVEALSDLLQCDSKYGFVVMDGHGTLFGTLAGNHREVLHKVSVDLPKKHGR
GGQSALRFARLRLEKRQNYVRKIAELTTQLFITDDRPNVNGIVMAGSADFKNQLLQSDLF
DQRLQPHIIMIVDVSYGGENGFNQAIELSAEALGNIKFIKEKKLIGKYFDEISQDSGKYC
FGVKDTLACLEMGAIETLIVWEDLAVDRCILLNSQTQEETIHFFTPEQQANNDNMKDPET
GVDLELTEKIPMMEWLANEYKNFGCTLEFITDRSEEGSQFVRGFGGVGGILRYQVNLADF
EVASDHGDSSDEYSSDDEGYI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatgacaacgccgaggagatcgagatgtggaaggtccgcaggctcgtcaaa
ggtctccaggaggctcgcgggaacggcacctccatgatttcgctcgtcatccctcccaag
ggccagatcaacctgaccgctaagatgctcgccgacgagctcggcaccgcgtcaaacatc
aagtcgcgcgtcaacaggcagtccgtgctcgccgccatcgggagcgcgcagcagcgcctg
aagctgtacaaccacgtcccccctaacggtctcgtcatctactgcgggaccgtgctgacg
gacgagggcaaggagaagaaggtgaacatggactttgagccattcaagcccatcaacacc
tcgctgtacatgtgcgacaacaagttccacgtcgaggcgctgtccgacctgttgcagtgc
gacagcaagtacggattcgtggtgatggacggtcacggcacgttgttcgggaccctcgcg
ggcaaccacagggaggtgctgcacaaggtgagcgtcgaccttcccaagaagcacggccgc
ggcggtcaatccgcgttgcgtttcgcgcgcctccgtctcgagaagcgccagaactacgtg
aggaagatcgccgagctcaccacccagctgttcatcaccgacgaccgccccaacgtcaac
ggtatcgtcatggccggttccgcggatttcaagaaccagctcttgcagtccgacctcttc
gaccagcgcctgcagccgcacatcatcatgattgtcgacgtctcctacggcggcgagaac
ggtttcaaccaggccatcgagctctccgccgaggcgctgggcaatatcaagttcatcaag
gagaagaagctcatcggcaagtacttcgacgagatcagtcaggacagcggcaagtactgc
ttcggggtgaaggataccctggcatgtctggagatgggggctatcgagacgctcatcgtg
tgggaggatctagcggttgataggtgcatcttgctcaacagccagacgcaagaggagacc
atccacttcttcaccccggagcagcaggcgaacaacgacaacatgaaggaccctgagacc
ggcgtggacctggagctgacggagaagatccccatgatggagtggttggcgaacgagtac
aagaactttggctgcacccttgagttcatcaccgaccgctcggaggagggctcacagttt
gtccggggcttcggaggcgtcggcggtatcctccgctatcaggtgaatcttgcggacttt
gaggtggctagcgaccacggcgactcctccgatgagtactcctccgacgatgagggctac
atctaa
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