Micromonas commoda: MICPUN_100979
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Entry
MICPUN_100979 CDS
T02695
Name
(RefSeq) predicted protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
mis
Micromonas commoda
Pathway
mis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUN_100979
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mis01002
]
MICPUN_100979
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_100979
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_100979
Peptidases and inhibitors [BR:
mis01002
]
Metallo peptidases
Family M1
MICPUN_100979
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MICPUN_100979
Coactivators
SAGA/TFTC/STAGA complex
MICPUN_100979
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
MICPUN_100979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
8244497
NCBI-ProteinID:
XP_002502846
JGI:
MicpuN3_100979
UniProt:
C1E880
LinkDB
All DBs
Position
6:535384..540495
Genome browser
AA seq
1703 aa
AA seq
DB search
MPASAMDVDAPRAWLPDVRRQHLDLDVGFVPGAGGYVRGHTTIVCRPLPTESGDATTLTL
HAHELVVTRVTVNDAPARVIRRGRTAVRPDGSDDPSGDDVDALAVADAGALSSGANIARN
ACEGMLADARAVADGAADELVIALEDGGVIASGGSSEDVVVRVWYGAGTAMNAFGVQPPD
SWRRIAPLVAHPRPPRAGEDPGGNDPTGGNDAGGDGNGGEGTGGNKVAQLDEVAQLDEVA
QLDEVARSRGEEPIDAYAGWCNPGDGALCAFVDSDEGNARYLCAPGSALRPAAWFPCVDD
GGSLVHFSAVVKVDPDLTAVLPGVLTKTDVIEETIRSPDDGAPARTRSRRAFHYVSGGVP
VQAHQMVLAVGTFATRKIPTSTAHGDTFAAAARAEEEDKEEEAAKNDADGTNARFHQYLD
NAAESTAHSSTHALHCPPCYAENELPAAASCATSALKSFETYLGRPFPYPGGLTFCFVPP
DALPVSMDLRLPAMLGAGVTILSTDRLGHPLSAADLVTSRTAIAECAARQLFGGFLEPRE
DTDAWLAEGLASYMAGACYISSLMGADELKYQRAREVEAVVECDDGDALPPLASPSARIW
ARGRSACGASAEEVKARAVGEARARGEDPDAVAALEHARDVAPASKPPRPPAPGVDTLVR
CKAVAVVEMLERKLGEEGMQKVIRKLASLQGKAPGAESLQEAAIAASKATRAAKEKAAAA
AEAAKTEGADESANAAAKEKAAATAREQLQREHQESIAYHALAESPARFLRSRVFLNLCR
QNATMTKADMSAFNARWIEGCGCPRLTAAYTFRKTRRQELLFAIKLDGCLAAAAADRVAW
SKNPKVSVTVRIQENDLPPSDHAVSLSAHDRAYVLMPLQLVTKPKDRRTIARQQEAAMRR
QQQAMEAGKANPDNLDAMAAAEVLQWECPVSWVRVDPEGEWLAKVVLPSAQQGLEGMITK
QLMSERPADPAAQMWAIRFLRERAENGSTSAVNALLQCAEDPKTFCRVRALAAMALGACA
CDGTQRSNLALSSVTRTYRRRRCDPRTGKPKPTDLADFAAAIVDEGLLTALGLPRAPPES
TSGWEDADDAWVTPTECVDLLVDALNHTESDGDPHDSSSLIATAIHALGRARPATLDGVR
RITRAIAGRMRENATICGVGGRAHEGGRRVMVAGMLALRTLLERLPPLPESIRAANEAKK
AIEAAGGGANGQGGPGVRRRRSAVTSLGDAEEKARLSAVAVAAVVSECVATARSFVADRV
GIDPCPAVRRAAVALQFGIEASHGGPCGVARALAFATLACKAEQSGGVRAAILWDARDAL
RAMPDAPAQLAALTGGSGTGTASDPDRHGFDVFEWTATSLRIASRRAGAETATAALAVMR
AASGLDDDYPHERDLADLKAREAAREAVLAGAAQAANDIEDEADEAERLERRRKKEEKAK
ARAEKEERRARKEERRARRRAAEAAAAAEAAAEAAAAGGGVGDDGAGASEMITDADGDVT
MGGFSDGGPVSGLTGGVTGVTGVTDDAEDSGAEGGAEGKSAEPLSQATGTPSLETPVTAP
APAAPAHPAPPPPPAPVPAPAAPAPAPAPAPAAAAPPPPAEPAQVVGVKRDRDEAFNSAA
GTPSSAAGAAGAAAAVTPAEQPAKKPRLVFAFGAKKPAAAAAPAAPEPEVKEKKEKKEKK
DKKEKKEKKEKREKERAAADAAP
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtcggccatggacgtcgacgcgcccagggcctggctccccgacgtgcggcgg
cagcatctggacctggacgtcgggttcgtccccggcgcgggagggtacgtgcgggggcac
accacgatcgtctgcaggccgctgccgacggaatcgggggacgccacaacgctcacgctg
cacgctcacgagctcgtggtgacgcgcgtgacggtgaacgacgcgcccgcgcgcgtgatc
cgacgagggaggaccgccgtgcgtcccgacgggtccgacgatccatcgggtgacgacgtc
gacgccctcgccgtcgccgacgccggcgcgctgagctccggggccaacatcgcgaggaac
gcgtgcgagggaatgctcgcggacgcgcgcgccgtcgccgacggcgcggcggacgagctc
gtcatcgcgctcgaggacggcggggtcatcgcgagcggcgggtcatccgaggatgtagtc
gtcagggtctggtacggcgcgggcaccgcgatgaacgcgttcggggtccagcccccggac
tcgtggaggcgcatcgcgccgctcgtggcgcacccgcgccctccgcgggcgggcgaggac
ccgggggggaacgaccctacgggggggaacgacgcggggggcgacgggaacggcggcgag
ggaaccggcgggaacaaagtcgcacagctggacgaagtcgcacagctggacgaagtcgca
cagctggacgaagtcgcacgaagccgcggggaggagcccatcgacgcgtacgcgggctgg
tgtaaccccggggacggggcgttgtgcgcgttcgtcgattcggacgaggggaacgcgcgg
tatctgtgcgcgccgggctccgcgttgcgtcccgcggcgtggttcccgtgcgtcgacgac
ggcggctcgttggttcactttagcgccgtcgttaaggtcgacccggacctcaccgcggtt
ctcccgggggtgctcaccaagacggacgtcatcgaggagacgatacgtagcccggacgac
ggcgcacccgcccggacgcggtcgcgacgggcctttcactacgtctccgggggggtgccg
gtgcaggcgcaccagatggtgttggcggttggcaccttcgccacgcgaaagatcccgacg
tcgacggcgcacggggatacgttcgccgccgcggctcgggcggaggaggaggacaaggag
gaggaggcggccaagaacgacgcggacggtactaacgccaggttccaccagtacctggac
aacgccgcggagtcaaccgcgcacagctcgacgcacgcgcttcactgtccgccgtgctac
gcggagaacgagcttcccgcggcggcttcgtgcgccacgtcggcgctgaagtcgttcgag
acctacctgggccgaccgttcccgtaccccggcggcctcaccttctgcttcgttcccccc
gacgcgctgccggtctcgatggacctgcggttgcccgcgatgctgggcgcgggcgtcacg
attctctcgacggataggctcggtcacccgctctcggcggcggacctcgtcacctctcga
acggcgatcgcggaatgcgccgcgaggcagctcttcggcgggttcctggagccaagggag
gacaccgacgcgtggctggcggagggactggccagttacatggcgggcgcgtgctacatc
tcgtcgctgatgggcgcggatgagctgaagtatcagagggcgcgggaggtggaggcggtg
gtcgaatgcgacgacggcgacgccttgcctccgctggcgtccccttccgcgaggatatgg
gcgcgcggacggtccgcgtgcggcgcctccgcggaagaggtgaaggcgcgggccgtcggg
gaggcgcgcgcgcgaggggaggacccggatgccgtcgcggctctcgagcacgccagagac
gtcgccccggcgagcaagccgccgaggcctcccgcgccaggcgtcgacacgctcgtgcgg
tgcaaggccgtggccgtcgtggagatgctcgagcgcaagctcggggaggaggggatgcaa
aaggtgatcaggaagctcgcctcgctgcagggcaaggctcccggcgcggagtcccttcag
gaggctgcgattgccgcgtcaaaggctaccagggcggctaaggaaaaagctgcggcggcg
gcggaggcggcgaagaccgagggcgcggacgagtccgcgaacgccgccgcgaaggagaag
gccgccgcgaccgcgcgcgagcagctccagcgggagcaccaggagtccatcgcgtaccac
gccctcgcggagtcaccggctcggttcctccggtcgcgggtgtttctcaacctgtgcagg
caaaacgcgacgatgacgaaggcggacatgtccgcgttcaacgcgcgctggatcgaggga
tgcggctgccccaggctcaccgccgcgtacaccttccgcaagacccggcgacaggagctc
ctgttcgcgatcaagctcgacggttgcctcgccgccgccgcggcggaccgggtggcgtgg
agcaaaaacccgaaggtttccgtgactgtccggatccaggagaacgacctgccgccgtcc
gaccacgccgtctccctctccgcgcacgacagggcgtacgtgctcatgcccctgcagctc
gtcaccaagcccaaggacaggcgcaccatcgcgcgccaacaggaggctgcgatgagacgg
cagcagcaggcgatggaagccggcaaggcgaacccggataacctcgacgcgatggccgcc
gccgaggtgctccagtgggagtgcccggtgtcgtgggttcgcgtggaccccgagggggag
tggcttgccaaggtggtcctgccctcggcgcagcaaggtctggaagggatgatcaccaag
cagctcatgtcggagcgcccggcggatccggcggctcagatgtgggccatccggttcttg
cgggagcgcgccgagaacggctccacctcggcggttaacgcgctgttgcagtgcgccgag
gaccctaaaacgttctgcagggtccgcgccctcgccgcgatggcgttgggcgcctgcgcg
tgcgacgggacgcagagatccaacctcgcgttgtcgtcggtgacgaggacgtaccgcagg
cgtcgatgcgatccacgaacgggcaaacctaaacccaccgacctcgccgacttcgccgcc
gccatcgtcgacgagggcttgctcaccgcgctgggcctaccccgcgcgcccccggagtcc
acgagcggttgggaggacgcggacgacgcgtgggttaccccgacggagtgcgtggatttg
ctggtggacgcgctgaaccacacggagagcgacggggatccgcacgattcgtcgtcgctc
atcgcgaccgcgattcacgcgctcggccgggccaggcccgccaccctcgacggcgtccgg
cggatcacgcgggcgatcgccgggcgcatgcgcgagaacgcgaccatctgcggcgtcggc
gggcgcgcgcacgagggcggccggcgggtcatggtcgcggggatgctcgcgcttcggaca
cttctggagcgccttccgccgctcccggaatccatccgagccgcgaacgaggcgaagaag
gccatcgaagcggcgggcggcggcgcgaacggccaaggcggacccggggtcaggcggcgg
cgctcggcggtgacgtccctcggtgacgccgaggagaaggcgcggctctccgccgtcgcc
gtcgccgccgtcgtctcggaatgcgtcgcgacggcgaggtctttcgtcgccgatcgcgtc
ggaatagacccgtgtccggccgtgcgacgcgccgccgtcgcgctccagtttggcatcgag
gcgtcgcacggcggtccgtgcggcgtcgcgagggccctcgcgtttgcgacgctcgcgtgc
aaagccgaacaaagcggcggggttcgcgccgccatcctctgggacgcccgcgacgccctg
cgtgcgatgccggacgcccccgcgcagctcgcagcgctcaccgggggatcaggcaccggc
accgcgagcgaccccgaccgccacggctttgacgtctttgagtggaccgccacgtcgctg
cgcatcgcgtcgcggcgggcgggggcggagacggcgacggcggcgctcgcggtgatgcgc
gccgcgtccgggctcgacgacgattacccccacgagcgggacctcgcggacttaaaagct
agggaggcggcgagggaggctgtcctcgcgggcgccgcgcaggctgcaaacgacattgag
gacgaggcggacgaagcggagcgtttagagcgccgacgtaaaaaagaggaaaaggcgaag
gcccgcgcggagaaggaggaacgaagggcgcggaaggaggagagacgcgcgaggcgacgc
gcggcggaggctgccgcggcggcggaggcggcggcggaggctgcagccgcgggcggcggg
gttggggacgacggcgcgggcgcgtccgagatgatcacggacgcggatggggacgtcacg
atggggggtttctccgacggcgggcccgtgtccggtctcacgggtggcgtcaccggcgtc
acgggcgtcacggacgacgcggaggacagcggagccgagggaggggccgaagggaagagc
gccgagccgctgtcgcaggcgacggggacaccgtcgctggagacgcccgtgacggctccg
gcgcccgcggctccggctcatccggcgccccctccccctcccgctcccgttcccgctccg
gcggctccggctccggctccggcacccgccccggcggcggcggctcctcctcctcccgcc
gaacccgcgcaggtcgtcggcgtcaaacgcgaccgggacgaggcgttcaactccgcggcg
ggaactccgagctcggcggcgggggcggcgggggcggcggcggcggtcacgccggcggag
cagccggccaagaagccgaggctggtgtttgcctttggcgccaaaaaacccgcggctgcc
gcggcgcccgcggcgcccgagcccgaggtcaaggagaagaaggagaagaaggagaagaaa
gataagaaggagaagaaggagaagaaggagaagcgagaaaaggagcgagcggcggcggac
gccgcgccgtag
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