Micromonas commoda: MICPUN_101294
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Entry
MICPUN_101294 CDS
T02695
Name
(RefSeq) predicted protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_101294
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
MICPUN_101294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Ribosomal_L4
Motif
Other DBs
NCBI-GeneID:
8245092
NCBI-ProteinID:
XP_002503445
JGI:
MicpuN3_101294
UniProt:
C1E9M2
LinkDB
All DBs
Position
7:128865..131831
Genome browser
AA seq
988 aa
AA seq
DB search
MDLSAVARQKARGGRAEPASPSATASMEADDHDSEGSDDDQPDPESAKQYVKQFVKNSLD
GVRGGRRAQYYEVLEALDGLASATPSGDPDKLLMLEVLGENVSSLDERLHEELLRRVMGT
SLWLCHEDIARLVVQFCVNLMSTHTGSMLATCLDMLVEAFLPPRGYPEGRLEDELDAYMR
TGQSPSPGADASRGDGEDMDDDESDPKGPPPRSAAETTAMIVGAITQILTLVPLSATVLG
GILLQRIPHKTAVKARQCQYLRAAFALVETPAGRPLRDGLLRGVVRHLLDVDVEIRWQDI
APDGDLSDDDETEVEDEEDDGKENGAGGIFELEDIEKTIEQELVRQAAAWERGESGAGGA
RQGSIRSPMHHGGGRDEIEEQIDMIDSMMTLVLAHIDRRIDSGDAAALNECLLKVFVSTL
LPAHESKFTQFLVFHACAREAAAKATSPGASLGANGGPHVANALTGEFDGTAQMLSARIV
DQLIGRVTDPIARPAPRLASAAYLASFLARAAWLRPPFLAATLRRLAHWCWATVESATSG
AGVTSVARVKSEGLSRGFGSSFQINENGENGDTAGGDNNTNTNNNTNNNNNSNEATGTEQ
VEFANASAATLAVFDSACQTLMYVLCYRMDDITRHGGEPAETLRSMPLRQILYSRLQPLH
TCVSEVVIEFLVRAAAAGMEGFDQALIERHKREDKERKDRADGGGAGGGGSFTVEDVAAQ
AVGEGGSRAGSHNGAAGIRRTQSVATLGREVAEAVRHRRPLRMFFPFDPYLLRRSSALLR
LPQSYVTWRGNARDDDDDGFSDDDDDDDDVATLDSELGSEDVGESSSDDDTDPGGAGRRD
SLSSRGAKPGSGGSLPNSLGYPNSLNPRPRKLTRGLRGPQPLFGGVGSVGGVGSPSPTNG
KGSTPPGANPFARASVGAGTSPDAVVTGFGVPTGVETTHARAWAAAAGVPTGVPTGVGFG
RGGSVSPTRKSPSPLGTSPLPPRPPRPS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggacctctccgcggtggcccggcagaaggctaggggcggacgcgcggagccggcgagc
cctagcgccacggcgtcgatggaggcggacgaccacgactcggaaggcagcgacgacgac
caaccggatcccgagagcgcgaagcagtacgtcaagcagttcgtcaagaactcgctggac
ggggtgcggggcgggcggcgagcgcagtactacgaggtcctcgaggcgttggacggcctc
gcgtccgcgacgccctccggggacccggacaagctgctcatgctggaggtgctcggcgag
aacgtgtcgtcgctcgacgagcggctacacgaggaactgctgcggcgcgtcatgggcacc
tcgctctggctctgccacgaggacatcgcgaggctcgtcgtgcagttctgcgtcaacctg
atgagcactcacaccggctcgatgctcgcgacgtgcctcgacatgctcgtcgaggcgttc
ctgcccccgaggggctaccccgaaggacggttggaggatgagctggacgcgtacatgagg
acggggcagtcgccgtctccgggcgcggacgcgtcgcggggcgacggggaggacatggac
gacgacgaatcggatcctaagggaccgccgcctcggtccgcggcggagaccaccgccatg
atcgtcggcgccatcacccagatcctcaccctggtgcccctgtccgccaccgtgctcggc
ggcatcttacttcaaaggatcccgcacaagacagccgtcaaggctcggcagtgccagtac
ctccgagccgcgttcgccttggtggagacgcccgcgggacggcccttacgcgacggcctg
ctgcggggcgtggtgagacacctgctggacgtggacgtggagatcagatggcaggatatc
gcccccgacggcgacctctccgacgatgacgagaccgaggttgaggacgaggaggacgac
gggaaggagaacggcgcggggggcatattcgagctcgaggacatcgagaagaccatcgag
caggagctggtgcgacaggcggcggcgtgggagcgcggcgagtccggcgcgggcggggcg
aggcagggatcgattcgatcgccgatgcaccacggcggcggccgcgacgagatcgaggag
cagatcgacatgatcgactcgatgatgacgctcgtgctggcgcacatcgacaggcggata
gactccggcgacgccgcggcgttgaacgagtgcctgctgaaggtgttcgtgtctaccctg
ctccccgcgcacgagtcaaagtttacgcagtttttggtgtttcacgcgtgcgcccgggaa
gcggcggcgaaggcgacatctcccggcgcctctctcggcgccaacggcgggccccacgtc
gcgaacgcactgacgggtgaattcgacgggaccgcgcaaatgttgagcgcgcggatcgtg
gaccagctcatcgggcgcgtcaccgacccgatcgctcgcccggctccgaggctcgcgtcg
gcggcgtacttggccagctttttggcccgcgccgcgtggctgcgccctccgttcctcgcg
gcgacgctgaggcggctggcgcactggtgctgggccacggtggagagcgcgacgagcggc
gcgggggtgacgagcgtggcgagggtgaagagcgagggactctcgcgcgggtttggttcg
tcgtttcagataaacgaaaatggcgaaaacggcgacacagctggcggcgacaacaacacc
aacaccaacaacaacaccaacaacaacaacaacagcaacgaggcgacgggcacggagcag
gtggagttcgcgaacgcgtcggccgcgacgctcgcggtgtttgacagcgcgtgtcagacg
ctcatgtacgtcctctgctatcgcatggacgacataacgcggcacggtggcgaacccgcg
gagactcttcggtccatgccgctccgacagatcctctactctcgcctccagcccctccac
acctgcgtctccgaggtggtcatcgagtttttggttcgcgccgccgcggcggggatggag
gggttcgatcaggcgctcatcgagcgtcacaagcgcgaggacaaggagcgcaaggaccgc
gcggatgggggcggcgcggggggaggcggaagtttcaccgtcgaggacgtcgccgcgcaa
gccgtcggcgagggggggtcgcgcgccggatcgcacaacggcgcggccggcatacgtcgc
acgcagtcggtggcgacgctcgggagggaggtggcggaggctgtgagacaccgtcggccg
ctacggatgttcttcccgtttgacccgtacctgctgagacggtcctcggcgctcctccgg
ctgccgcagagttacgtcacgtggcggggcaacgcccgcgacgacgacgacgacgggttc
agcgacgacgacgacgacgacgacgacgtcgccaccctggactccgagctcgggtccgag
gacgtgggcgagagttcgtcggatgacgacaccgacccggggggcgccggccgaagggac
tcgctgagctccaggggcgcgaaacccggaagcggtgggtccctgccaaactcgctgggc
tacccgaactcgttgaacccgaggccgaggaagctcacgcgcgggctcaggggtccgcag
cccctcttcggaggggtcggcagcgtcggcggcgtcggctccccgtcgcccacgaacggc
aagggttcgaccccgccgggcgctaaccccttcgccagggcgagcgtcggcgcgggcacc
tccccggacgcggtagtgacgggtttcggcgtgcccaccggggttgaaacgacgcacgca
cgggcgtgggcggcggcggcgggggtgcccacgggggtgcccaccggggtcgggttcgga
cggggcggtagcgtgagcccgacgaggaagtcgccgtcgccgctcggcacgtcgccgctt
cccccgcgaccccctcggccctcttga
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