Micromonas commoda: MICPUN_101327
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Entry
MICPUN_101327 CDS
T02695
Name
(RefSeq) predicted protein
KO
K13098
RNA-binding protein FUS
Organism
mis
Micromonas commoda
Pathway
mis03015
mRNA surveillance pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_101327
09122 Translation
03015 mRNA surveillance pathway
MICPUN_101327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_101327
Spliceosome [BR:
mis03041
]
Complex A
Other components
Complex A specific factors
MICPUN_101327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCCH_4
Zn_ribbon_RanBP
zf_CCCH_4
zf-CCCH
RRM_5
zf-CCCH_12
zf-CCCH_DUS3L
zf-CCCH_10
Torus
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
8245118
NCBI-ProteinID:
XP_002503828
JGI:
MicpuN3_101327
UniProt:
C1E9S3
LinkDB
All DBs
Position
7:complement(join(228171..229454,229535..229636))
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AA seq
461 aa
AA seq
DB search
MSGNRIMVGNLPYEADERAISDALGHLGHITDCKVITDRETGRSRGFGFVTFADASAAAA
AVQTMHGADIMGRACRIDFSEDRRGGGGGGGGRGPPGPPGGYAPSGGGGGYDRDRSGGYD
RDRGGGYDRGGRDSRGGGGYDGGGRPPPPTDQPPPPPDSSAYGGYAGPVVEAGAGARGVC
NDFLRGACKWGDRCRYSHVGGASQAAPPPSDRRDDGPKVELGGDWNCDGCGNSNFSWRKT
CKKCNAPKSQALKDAEKAATGGWLTAGLSDTSNRIFVKGFDPEKVNEDDLKELFGGIGII
ARVRQRHGFPDQWPHAVKIYKDEAGKPKDEAVIKYDDPMAAQSAPGFYDGFELKGSKLSV
SIATSKERPEDEGGGGGGGGGYGGRGGGYGGGRGGGRGGGGYGGRGGGGRGGGYRGGGGG
GGYGGGGGGYGGGGGGGYGGGGDRGGYRGGGGGGYDRHRPY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtaaccgcatcatggtcggaaatctgccctacgaggccgacgagcgcgcaatc
tcggacgcgctcggccacctcggccacatcaccgactgcaaggtcatcaccgacagggag
accggcaggtcccggggtttcggcttcgtcaccttcgccgacgcgtccgcggcggcggcg
gcggtgcagacgatgcacggcgccgacatcatgggacgcgcgtgccgcatagacttcagc
gaggatcgcaggggaggcggaggaggaggcgggggcaggggcccgcctggcccgcccggc
ggctacgcaccatccggcggcggcggcggatacgatcgcgacaggagcggcggatacgat
cgcgacaggggcggcggatacgacaggggcggtcgcgacagtcgcgggggaggaggctac
gacgggggcggtcgtccgcccccgcccacggaccaacccccgcccccgcccgactcgtcc
gcgtacggcggctacgccggtcccgtcgtcgaggctggcgcgggcgcccgcggcgtgtgc
aacgatttccttcggggcgcgtgcaagtggggcgatcgatgccgctactcgcacgtcggc
ggagcgtctcaagctgcgcccccgccttcggaccgaagggacgacggcccgaaggtggag
ctcggcggtgactggaactgcgacgggtgcggcaacagcaacttctcctggcgcaaaacc
tgcaagaagtgcaacgcgccaaagtcgcaggctctgaaagacgcggagaaggcggctacc
gggggttggctcaccgctggtctctcggacaccagcaacaggatcttcgtcaaggggttc
gacccggagaaggtgaacgaggacgacctgaaggagctcttcggcggcatcgggatcatc
gcgcgcgtcaggcagcggcacggtttccccgaccagtggccccacgccgtcaagatctac
aaagacgaagccggcaagccgaaggacgaagccgtcatcaagtacgacgatccgatggcg
gcgcaatccgcgccgggtttttacgacgggttcgagctgaaggggagtaagctgtcggtg
tccatcgccacctccaaggagaggcccgaggacgagggcggcggcggcggcggcggcggg
ggatacggcggtcgcggcgggggatacggcggcggtcgcggcgggggcaggggcgggggg
ggatacggcggccgcggcggcgggggccggggtggggggtaccgcggcggcggcggggga
gggggctacggcggcgggggagggggctacggcggcggcgggggagggggctacggcggc
ggtggggaccgcggcggatacaggggaggcggcgggggagggtacgacaggcaccggcct
tactga
DBGET
integrated database retrieval system
