Micromonas commoda: MICPUN_103707
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Entry
MICPUN_103707 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14300
nuclear pore complex protein Nup133
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_103707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_103707
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_103707
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MICPUN_103707
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MICPUN_103707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
8248607
NCBI-ProteinID:
XP_002505430
JGI:
MicpuN3_103707
UniProt:
C1EFZ7
LinkDB
All DBs
Position
13:join(221510..221564,221701..225257)
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AA seq
1203 aa
AA seq
DB search
MWRVQCKLPSRVSDVLQTGNAGSARGGLDAECGTAWVTHEGRVHAWALPSRAGDRSTEGG
AVPDTYAEYDVAPRVAGDTSPPLVHVASADGGATLWVVAAGAASGKVAVARCDGVAGTRE
EMGEARLPRRENTGAAPCVTALTAMPSARGGLIAVVGCDRGELFLVECVARGTVTVTAIN
RRDGASGGGTPGGASTPGGGSNATYTPSKWGAAAMSSAKAALRFLTDPLAVDATETDEDA
VRSLAWAGPAPGRGDATRLIALTGRRLEEWEVDRDGGGGHALVVSNRALGAVMRALRTEG
DVELISAAPAPGAGVGAVVVLAAEGRRWSLHRAELCAGGGSLAVLASAVPAAGAVPSGGG
ARGGATVLAGGAPTDAALVVTPGGGAALFAHETLSEQMLMHDPAAGGGRVMSAAAAPSVG
GWLMLTELMGVVAYSPATAAAAATPTEVEREMETEAPPPLAAVDVPIPPIDVDPAEAEAA
VRAEFAAYASGSGGVPSEAGFRLRAAGALTSSLDAAASPEVVCAAPFASNSRAIVDALPK
HWPGPSGPGPAVEMHLDEKARRHDMFLQWLVEAAGVYNLLSAAERERILEHGEMVAALLC
VRQIHNEAAEADELEGGVGEQVGKPLELLRDAAVAAGEALQSSDAAVKGRPAAEVCYSRA
TGCATALLPALADGIDAHAGAESRGSLHERATALDTLSRALLGALNAAADYRRSHAPLYP
PFVSSGSTAPAPRWNAGEGARRALRAAAVAAVLLRDEAARGGAPDLAAPLGSRLLAVATP
LLDACAADVAAAEAGSDARAAARAEYISARNTVLPALMDAAREGGGGSGGFHGAVRPGFG
VTMDAVAAVAEAHFGYEQLAEVCEAALAEAADAAAVASATARLHHHMRTLRGAPVDGEGT
FATFMFERSMCHPGCSGSVGRRIAETLQNTPDEFYDELTDCLRPRPPLLWLHQLRADDYV
GAASTLRGLSGTGAKGISGKGATLAERRQFLSLAKLSLLASGASSEADEIVSIDAALNLT
EIQSGLLARRSGGKGDDSATPLPPLRLVESCLGEGNGGAAGSEPEDVLDAFSVFASAGGA
FREANKTLLEACWRRAAAETDWEQLSELRASAGDIKYVRSLVNTPVARAARRCYQKSFAV
RLGPPFDEVLTPRDVLNLLEGAIGGGDKSDAALDPIREAIGLYALVEGDDEDVVPRDSYD
MDV
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcgtgcagtgcaagcttccgagccgcgtgtcggacgtgcttcagacaggcaat
gcgggcagcgcgcgcggcggtctggacgccgaatgcggcaccgcgtgggtgacgcacgag
ggcagagtgcacgcgtgggcgctcccatcgcgcgccggcgatcgttccaccgagggcggc
gccgtgcccgacacgtacgccgagtacgacgtcgctccccgagtggccggggacacgtcg
ccccctctcgtgcacgtcgcctccgcggacgggggcgccacgctctgggtagtggcagcg
ggagcggcttcgggcaaggttgcggtggctcggtgcgacggcgtcgccgggacgagggag
gagatgggagaggcaaggctgccgcggcgggagaacacgggcgccgcaccctgcgtcacc
gcgctcacggcgatgccgtcggcgaggggcgggttgatcgccgtcgtcgggtgcgaccgc
ggcgagctgttcctcgtcgagtgcgtcgcgcggggaacagtgacggtgacggcgatcaac
cgcagggacggcgcgagcggcggcggcacgccgggcggagcgtccacgcccggcggaggc
tccaacgcgacgtacaccccgtccaagtggggcgcggcggcgatgtcgtcggcgaaggct
gcgctgcgcttcctcaccgatcccctcgcggtggacgcgacggagacggacgaggatgcc
gtcaggtcgctcgcgtgggcgggacccgcgccgggccggggcgacgcgacgaggctcata
gcgctgaccggtcgacgcctggaggagtgggaggtggaccgcgacgggggcggaggtcac
gcgcttgtcgtctccaaccgcgcgctgggtgccgtgatgagggcgctgagaacggagggg
gacgtcgagctcatctccgccgcccccgcgccgggagccggggtcggcgccgtcgtcgtg
ctcgcggcggagggtcggcgttggtcgctccaccgcgccgagttgtgcgcgggaggtggc
tcgctcgccgtcctggcatccgcggtgcccgccgcgggagccgtcccgagcggcgggggc
gcgcgaggcggggctaccgttctcgcgggtggcgcgccgacggatgccgcgctcgtcgtc
acccccggcggcggcgcggcgctcttcgcgcacgagactctcagcgaacagatgctcatg
cacgacccggcggcgggaggtggacgcgtcatgtcggccgcggcagcaccctcggtcggg
ggctggctcatgttgacggagctcatgggggtggtcgcctactccccggcgacggcggcg
gccgcggcgacgccgactgaggttgagcgggagatggagacggaggcgccgccgcccttg
gccgccgtggacgtacccatccctccaatcgacgtcgatcccgccgaggcggaggctgcg
gtacgcgccgagtttgccgcgtacgcgagtggcagcggcggggttccctccgaggctggg
ttcaggcttcgcgcggcgggcgcgctcaccagctccctcgacgccgccgcttcgccggag
gttgtatgcgccgcccccttcgcgtccaacagcagggccatcgtcgacgcgcttcccaag
cactggcccggtccgtccggcccgggacccgcggtggagatgcacctggacgagaaggcc
aggcgtcacgacatgttcctgcagtggctcgtcgaggctgctggggtgtacaacctcctc
tccgcggcggagcgagaacggattttggagcacggcgagatggtcgcggcgctcctctgc
gtgagacagatccataacgaggccgccgaggctgacgagttggaaggcggcgtcggagag
caagtcggaaaaccgctcgagctgcttcgcgacgccgcggtggctgcgggcgaggcgctt
cagtcgtcggacgccgccgtgaagggacgaccggccgcagaggtgtgctacagtcgggcc
acgggatgtgccacggcgcttctcccggcgctcgcggatggtatcgacgcgcacgccggc
gccgaatcgcgggggtcgctgcacgaacgggcgacggcactggacacgctctcccgggct
ctgctcggagctctcaacgccgcggccgactacaggcgctcccacgcgccgctgtatccg
ccgttcgtctcttcgggttcgaccgcgccggcgccgaggtggaacgcgggcgagggcgcg
agacgggccctgcgcgcggcggcggttgccgccgtgcttctcagggatgaggctgcccgc
ggaggtgctccggatctcgccgcgccgctcggatccaggctgctcgcggttgcgacgcca
ctgctggacgcgtgcgcagctgacgtagccgccgcggaggcggggtcggatgcacgcgcc
gctgcacgcgccgagtacatatccgcgcgtaacacggttctgcccgctctcatggacgcc
gcgcgagagggcggcgggggatcaggcgggttccacggcgctgtccgtcccggctttggg
gtcacgatggacgccgtcgccgcggtggccgaggcacactttggatacgagcaactcgcg
gaggtgtgcgaggcggcgttggcggaagccgccgacgccgccgccgtggcttccgccacg
gctcgtctgcatcaccacatgcgcaccttgcgaggcgcacccgtggacggggaagggact
ttcgccacttttatgtttgaacgttcgatgtgtcaccccgggtgcagcggcagcgtcgga
aggaggatcgctgagacgctccagaacactccagatgagttctacgatgagctcacggac
tgtttgcgaccccggccgccgctcctgtggctgcatcagctgcgtgccgacgactacgtc
ggggcggcatccacactgcgcgggctgagcggcaccggagccaagggaatttccggcaag
ggagcaacgctcgccgaacggcgacagttcctctcgctcgcgaagctctcgctcctcgcc
tctggtgcgtcgagcgaggctgatgagattgtgtcgattgacgccgcgctcaaccttacc
gagatccaatccgggctcttggcgcggaggtccggcggcaagggggacgactccgcgaca
cccttacctccgctgcgactggtggagtcgtgcctcggcgagggcaacggcggcgccgct
ggaagtgaacccgaggacgtgctcgacgcgttttcagtgtttgcttccgcgggaggagcg
ttcagggaggcgaataaaacccttttggaggcgtgctggcgcagggcggctgctgagaca
gattgggagcagctctcggagcttcgcgcctccgcgggtgacatcaagtacgtccggtca
ctcgtgaacacgccggtggcgagggccgcgcgccgatgctaccagaagtccttcgcggtt
cgcctcggaccgccgtttgatgaggttctcacaccgcgagacgtgctgaacctgctcgag
ggtgccatcgggggaggggacaagagcgacgcggcgctggatcccatcagggaggcaatt
ggactctatgccttggtcgaaggcgacgacgaggacgttgtcccgcgggactcgtacgac
atggacgtttga
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