Micromonas commoda: MICPUN_103834
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Entry
MICPUN_103834 CDS
T02695
Name
(RefSeq) predicted protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mis
Micromonas commoda
Pathway
mis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MICPUN_103834
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mis01007
]
MICPUN_103834
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_103834
Enzymes [BR:
mis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MICPUN_103834
Amino acid related enzymes [BR:
mis01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MICPUN_103834
Transfer RNA biogenesis [BR:
mis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MICPUN_103834
Prokaryotic type
Other AARSs
MICPUN_103834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF1574
DUF6033
Motif
Other DBs
NCBI-GeneID:
8248461
NCBI-ProteinID:
XP_002505774
JGI:
MicpuN3_103834
UniProt:
C1EF52
LinkDB
All DBs
Position
13:complement(join(601493..601720,601871..603575,603895..603965))
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AA seq
667 aa
AA seq
DB search
MSEPTAAPELKEYPEFPGEKLSKSEYKKRLKAAQNAKAKAEKEAAKAAKAAAQPAKEKSE
EEQEGELDATQYTANRINKILQRKAQGEHPYPHKFHVDTQLPKFIEQFASTVADGEVKTD
VVVSVAGRLMSKRASGTKLMFYDLRGDGVKIQVMADAKNATEYDFEKCHASTRRGDIVGI
RGHPGKSKKGELSIFPCHMEVLTPCLHMLPGFSGLKDQETRYRKRYLDLIMNPEVRDIFI
TRSNVIRSIRKYLDDKDFVEVETPMMNMIPGGATAKPFITHHNDLDMTLYMRIAPELYLK
ELVVGGMDRVYEIGRQFRNEGIDMTHNPEFTTCEFYMAYADYEDLMKMTEELISGMVLKL
KGSYKIQYHANGPDEPPVEIDFTPPFKRFSMIADLEKALDIKIPMPLESDECNAFLKATV
ERVGSECALPHTTPRLLDTLVGDYLETQCLNPGFICDHPKIMSPLAKYHRSLPDMTERFE
LFVNKREVCNAYTELNDPIVQRERFADQAKQKAAGDDEAMFVDETFCESLEYGLPPTGGW
GIGVDRLTMMLTDTANIKEVLLFPAMKPEDNAVRDNTHDVPAAVAAAAAAAKATKPGAAA
EAGAGVKPTDANQRPKPDKKDVVAPERKPLQHDEPTSDEWATGKLGRPAGALETKEWGET
FYTAPEK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcccaccgccgctcccgagctcaaggagtatcccgagttccccggcgagaag
ctctccaagagcgagtacaagaagcgcctcaaggctgcgcagaacgccaaggccaaggcg
gagaaggaggctgccaaggctgccaaggccgccgcccagcccgccaaggagaaatccgag
gaggagcaggagggtgagctcgacgcgacgcagtacaccgccaacaggatcaacaagatc
ctgcagcgcaaggctcagggcgagcacccgtacccgcacaagttccacgtcgacacgcag
ctccccaagttcatcgagcagttcgcgtccaccgtcgcggacggggaggttaaaacggac
gtcgtcgtctccgtcgccggccgcttaatgtccaaaagagcgtcgggcacgaagctgatg
ttctacgatctcaggggcgacggcgtgaagatccaggtcatggcggacgctaagaacgcc
accgagtacgacttcgagaagtgccacgcgtcgacccgccgcggagacatcgtcggcatc
cgcggccacccgggcaaatccaagaagggcgagctgtccatcttcccgtgccacatggag
gtgctgacgccgtgcctgcacatgctccccggtttctccggcctcaaggatcaggagacc
aggtaccgcaagaggtacctcgacctcatcatgaaccccgaggttcgcgacattttcatc
accaggtccaacgtcatccgaagcattcgcaagtacctggacgacaaggatttcgtcgag
gttgagactccgatgatgaacatgatccccggcggcgccaccgccaagcccttcatcacc
caccacaacgacctcgacatgaccctgtacatgcgcatcgcacccgagctctacctcaag
gaactcgtcgtcggcggcatggaccgcgtctacgagatcggccgtcagtttcgcaacgag
ggcatcgacatgacccacaaccccgagtttacgacgtgcgagttttacatggcgtacgcg
gattacgaggatctgatgaagatgaccgaggagctcatctccggcatggtgctcaagctc
aagggatcgtacaagatccagtaccacgccaacgggccggacgagcccccggtcgagatc
gactttaccccgccgttcaagcgcttcagcatgatcgccgacctcgagaaggcgctcgac
atcaagatcccgatgccgctcgagagcgacgagtgcaacgccttcctcaaggcgacggtg
gagagggtgggcagcgagtgcgcgctcccgcacaccaccccgcggcttctggacaccctc
gtcggagattacctcgagacccagtgcctcaacccgggtttcatctgcgaccaccccaag
atcatgtcgccgctggccaagtaccaccgatcgctgccggacatgacggagcggttcgaa
ctcttcgtgaacaagcgcgaggtgtgcaacgcgtacaccgagttgaacgaccccatcgtg
cagcgcgagcggttcgcggaccaggcgaagcaaaaggctgccggcgacgacgaggcgatg
ttcgtggatgagaccttctgcgagtccctggagtacggcttgccgccgacggggggctgg
ggcatcggcgtcgaccgcctgacgatgatgctcaccgacaccgcgaacatcaaggaggtg
ctgctgttccccgcgatgaaaccggaggataacgccgtgagggataacacgcacgatgtg
cccgcggcggtcgcggcggcggcggcggcggccaaggccaccaagcccggcgccgccgcg
gaggctggcgcgggcgtcaagcccacggacgccaaccagaggcccaagcccgacaagaaa
gacgtcgtcgcgcccgagcgcaagccgctgcaacacgacgagcccaccagcgacgagtgg
gccaccggcaagctgggccggcccgcgggcgcgttggagacgaaggaatggggcgagacg
ttctacaccgcaccggagaagtga
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