KEGG   Micromonas commoda: MICPUN_104036
Entry
MICPUN_104036     CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
mis  Micromonas commoda
Pathway
mis03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MICPUN_104036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mis03009]
    MICPUN_104036
Ribosome biogenesis [BR:mis03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    MICPUN_104036
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 EIF3I Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Lactonase Cytochrom_D1 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 8249048
NCBI-ProteinID: XP_002505918
JGI: MicpuN3_104036
UniProt: C1EGS3
LinkDB
Position
14:203363..205867
AA seq 834 aa
MLELHRSRFVEWQPSAVVALAVAPGGRAVALARETGDIEVYDTIDWRCSARIPGHEGAAV
SALAWCAPFDIDAEEDDVGGGAPCVLLSAGLDGQITEHDLNTLRPRSVTDSHGGSVWCLC
AEPRPKPGQPQRVAVACDDGAVRFVVVLAGEGVGRGLQHRRGFGAVGGRCLSLAWHPAGV
NIAAGTSKAHIHVWDVANSREIERITVQGRDKLNKYGKEGDELCVWALDYLPDGTIVSGS
SEGDVTFWDGKFGTKLYTFKQHAADVLAVASSPDGRFVYASGIDSQVAQFERVDADANTW
AYTTCKRPHTHDVKAMAMASGPAGAVLLTGGNDAQLLAYHAHAFRKRHPVRVVSVPQRTP
LALTGGGLWTGVSATGKKGKKGGGGGGADVNGKSERMEVKPQVGHPDPPLLLCDHSRWVD
VWRLGEGIHGGPGGATAEAVDSVKGHDGMMKLAAAPTHVLRAKLGGSRRTLCSAISPDGK
FIAVSDTHALRLFQLIVEEGGEYRIEKQDTPKGVNAAQQLVFTPDGKVLIAVGASGAIHV
IDLHAGEATGKLTAHVPKISSAALALEQASAAAKSGKRKAGDEGGAPDADKGAVSVEDIG
CPPVSHVCCSADNQWLAVITTKGHRRVAGVHVYSLDNLKLHASLPAPPGHASWPPVSAVA
LSASGILALAVRDNGLLTYDVESKELTQWSSTLASAGMSAPREMASLPGQICNLSFDPTP
GSSVLLAQTPSAIARMNLSKKPVVDAPAPSKKRRKRERERGPGGHGGGDGKSELQPRNGN
PGQGGDGDVKVATLDNPCLLLSYFAPRQALMVERPWEEVLEAMPAPLYRHRYGT
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgctcgagctccacaggtcgaggttcgtggagtggcagccatcggcggtggtggcgctg
gcggtggcccccgggggtcgcgccgtggcgctggcgagggagactggggacatcgaggtg
tacgatacgatcgactggaggtgcagcgcgaggatcccgggtcacgagggcgcggcggtg
tccgccttggcgtggtgcgcgcccttcgacatcgacgccgaggaggacgacgtcggcggc
ggcgccccgtgcgtgctcctcagcgcggggctggacggccaaatcaccgagcacgacctc
aacacgctgcggcccaggagcgtgacggactcgcacggaggatccgtctggtgcctctgc
gcggaacccaggcccaagcccgggcagccccagcgcgtcgcggtcgcgtgcgacgacggc
gcggttcgcttcgtcgtggtcttggctggcgagggcgtgggccggggcctgcagcaccga
agggggttcggagccgtcggaggcaggtgcctctccctcgcgtggcaccccgccggcgtg
aacatcgccgcgggtaccagcaaggcgcacatacacgtctgggacgtggccaactcgcgc
gagattgagcgcatcaccgtgcagggcagggacaagctcaacaagtacggcaaggagggc
gacgagctatgcgtctgggcgctggactacctcccggatggcacgatcgtgagcggcagc
agcgagggcgacgtcacgttctgggacggtaagttcggcaccaagctgtacaccttcaag
cagcacgccgcggacgtgttggcggtcgcctcgtccccagacggccgattcgtgtacgcg
tctggcatcgactcgcaggttgcgcagtttgaacgagtcgacgcggatgcgaacacgtgg
gcgtacaccacgtgcaagaggccgcacacccacgacgtcaaggcgatggcgatggcgtcc
ggccccgcgggagccgtgctgctcacggggggtaacgacgctcagcttctcgcgtaccac
gcgcacgcgtttcgcaagaggcacccggtgcgggtggtgtcggtgccgcagaggacgccg
ctcgcgctcaccggcggcgggctgtggaccggcgttagcgcgacggggaagaaggggaag
aagggcggcggcggcggcggcgcggacgtcaacggcaagtcggagaggatggaggttaag
ccgcaggttggccaccccgacccgccgctgctcctctgcgaccattcgcggtgggtggat
gtgtggcggctcggcgagggcatccacggcgggccgggcggcgcgacggcggaggccgtg
gactctgtcaaggggcacgacgggatgatgaaactcgcggcggcgcccacgcacgtcctg
agggccaagctcggcggcagcagacggacgctgtgctcggccatctccccggatggcaaa
ttcatcgccgtgagcgacacccacgcgctccgtctgtttcaattgatcgtcgaggagggc
ggcgagtacaggatcgagaagcaggacacccccaagggagtcaacgccgcgcagcagctg
gtgttcaccccggacggcaaggtgctcatcgccgtcggagcttcgggtgccatccacgtc
atcgaccttcacgccggggaggccaccgggaagctcaccgcgcacgttcccaagatatct
tccgcggcgctcgcgctggagcaggcgtccgcggcggctaaatccggtaagcgcaaggct
ggcgacgagggaggcgcgccggacgctgacaagggagcagtgtcggtggaagacatcgga
tgccccccggtttcgcacgtgtgctgcagcgcggacaaccagtggctcgcggtgatcacc
accaagggccacaggcgcgtcgcgggcgtgcacgtgtacagcctcgataacctgaagcta
catgcgtcgctccccgcgccacccggccacgcgtcctggcccccggtatcagccgtggct
ctgtcggcgtcgggcatcctggcgctggcggtgagggacaacgggctgctcacgtacgac
gtcgagagcaaggaactgacgcagtggtcgtcgaccctcgcctccgcggggatgagcgct
ccgcgcgagatggcgtcgctccccgggcaaatttgtaacctcagcttcgaccccacgccg
gggtcgagcgtcctcctggcgcagaccccgtcggcgattgcgagaatgaacctctcaaag
aagccagtcgtcgacgcgcccgcgccgtccaagaagcggcggaagagggagagggagagg
ggacccggcgggcacggcggtggcgacggtaagtcggagctgcagcccagaaacggtaac
cccgggcagggcggcgacggcgacgtcaaggtggccacgttggacaacccgtgcctgctg
ctctcctatttcgcacccaggcaggcgctgatggtggagagaccgtgggaggaggtgctc
gaggccatgccggcgccgttgtaccgccatcgctacgggacgtga

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