Micromonas commoda: MICPUN_104036
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Entry
MICPUN_104036 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
mis
Micromonas commoda
Pathway
mis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MICPUN_104036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_104036
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MICPUN_104036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Lactonase
Cytochrom_D1
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
8249048
NCBI-ProteinID:
XP_002505918
JGI:
MicpuN3_104036
UniProt:
C1EGS3
LinkDB
All DBs
Position
14:203363..205867
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AA seq
834 aa
AA seq
DB search
MLELHRSRFVEWQPSAVVALAVAPGGRAVALARETGDIEVYDTIDWRCSARIPGHEGAAV
SALAWCAPFDIDAEEDDVGGGAPCVLLSAGLDGQITEHDLNTLRPRSVTDSHGGSVWCLC
AEPRPKPGQPQRVAVACDDGAVRFVVVLAGEGVGRGLQHRRGFGAVGGRCLSLAWHPAGV
NIAAGTSKAHIHVWDVANSREIERITVQGRDKLNKYGKEGDELCVWALDYLPDGTIVSGS
SEGDVTFWDGKFGTKLYTFKQHAADVLAVASSPDGRFVYASGIDSQVAQFERVDADANTW
AYTTCKRPHTHDVKAMAMASGPAGAVLLTGGNDAQLLAYHAHAFRKRHPVRVVSVPQRTP
LALTGGGLWTGVSATGKKGKKGGGGGGADVNGKSERMEVKPQVGHPDPPLLLCDHSRWVD
VWRLGEGIHGGPGGATAEAVDSVKGHDGMMKLAAAPTHVLRAKLGGSRRTLCSAISPDGK
FIAVSDTHALRLFQLIVEEGGEYRIEKQDTPKGVNAAQQLVFTPDGKVLIAVGASGAIHV
IDLHAGEATGKLTAHVPKISSAALALEQASAAAKSGKRKAGDEGGAPDADKGAVSVEDIG
CPPVSHVCCSADNQWLAVITTKGHRRVAGVHVYSLDNLKLHASLPAPPGHASWPPVSAVA
LSASGILALAVRDNGLLTYDVESKELTQWSSTLASAGMSAPREMASLPGQICNLSFDPTP
GSSVLLAQTPSAIARMNLSKKPVVDAPAPSKKRRKRERERGPGGHGGGDGKSELQPRNGN
PGQGGDGDVKVATLDNPCLLLSYFAPRQALMVERPWEEVLEAMPAPLYRHRYGT
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagctccacaggtcgaggttcgtggagtggcagccatcggcggtggtggcgctg
gcggtggcccccgggggtcgcgccgtggcgctggcgagggagactggggacatcgaggtg
tacgatacgatcgactggaggtgcagcgcgaggatcccgggtcacgagggcgcggcggtg
tccgccttggcgtggtgcgcgcccttcgacatcgacgccgaggaggacgacgtcggcggc
ggcgccccgtgcgtgctcctcagcgcggggctggacggccaaatcaccgagcacgacctc
aacacgctgcggcccaggagcgtgacggactcgcacggaggatccgtctggtgcctctgc
gcggaacccaggcccaagcccgggcagccccagcgcgtcgcggtcgcgtgcgacgacggc
gcggttcgcttcgtcgtggtcttggctggcgagggcgtgggccggggcctgcagcaccga
agggggttcggagccgtcggaggcaggtgcctctccctcgcgtggcaccccgccggcgtg
aacatcgccgcgggtaccagcaaggcgcacatacacgtctgggacgtggccaactcgcgc
gagattgagcgcatcaccgtgcagggcagggacaagctcaacaagtacggcaaggagggc
gacgagctatgcgtctgggcgctggactacctcccggatggcacgatcgtgagcggcagc
agcgagggcgacgtcacgttctgggacggtaagttcggcaccaagctgtacaccttcaag
cagcacgccgcggacgtgttggcggtcgcctcgtccccagacggccgattcgtgtacgcg
tctggcatcgactcgcaggttgcgcagtttgaacgagtcgacgcggatgcgaacacgtgg
gcgtacaccacgtgcaagaggccgcacacccacgacgtcaaggcgatggcgatggcgtcc
ggccccgcgggagccgtgctgctcacggggggtaacgacgctcagcttctcgcgtaccac
gcgcacgcgtttcgcaagaggcacccggtgcgggtggtgtcggtgccgcagaggacgccg
ctcgcgctcaccggcggcgggctgtggaccggcgttagcgcgacggggaagaaggggaag
aagggcggcggcggcggcggcgcggacgtcaacggcaagtcggagaggatggaggttaag
ccgcaggttggccaccccgacccgccgctgctcctctgcgaccattcgcggtgggtggat
gtgtggcggctcggcgagggcatccacggcgggccgggcggcgcgacggcggaggccgtg
gactctgtcaaggggcacgacgggatgatgaaactcgcggcggcgcccacgcacgtcctg
agggccaagctcggcggcagcagacggacgctgtgctcggccatctccccggatggcaaa
ttcatcgccgtgagcgacacccacgcgctccgtctgtttcaattgatcgtcgaggagggc
ggcgagtacaggatcgagaagcaggacacccccaagggagtcaacgccgcgcagcagctg
gtgttcaccccggacggcaaggtgctcatcgccgtcggagcttcgggtgccatccacgtc
atcgaccttcacgccggggaggccaccgggaagctcaccgcgcacgttcccaagatatct
tccgcggcgctcgcgctggagcaggcgtccgcggcggctaaatccggtaagcgcaaggct
ggcgacgagggaggcgcgccggacgctgacaagggagcagtgtcggtggaagacatcgga
tgccccccggtttcgcacgtgtgctgcagcgcggacaaccagtggctcgcggtgatcacc
accaagggccacaggcgcgtcgcgggcgtgcacgtgtacagcctcgataacctgaagcta
catgcgtcgctccccgcgccacccggccacgcgtcctggcccccggtatcagccgtggct
ctgtcggcgtcgggcatcctggcgctggcggtgagggacaacgggctgctcacgtacgac
gtcgagagcaaggaactgacgcagtggtcgtcgaccctcgcctccgcggggatgagcgct
ccgcgcgagatggcgtcgctccccgggcaaatttgtaacctcagcttcgaccccacgccg
gggtcgagcgtcctcctggcgcagaccccgtcggcgattgcgagaatgaacctctcaaag
aagccagtcgtcgacgcgcccgcgccgtccaagaagcggcggaagagggagagggagagg
ggacccggcgggcacggcggtggcgacggtaagtcggagctgcagcccagaaacggtaac
cccgggcagggcggcgacggcgacgtcaaggtggccacgttggacaacccgtgcctgctg
ctctcctatttcgcacccaggcaggcgctgatggtggagagaccgtgggaggaggtgctc
gaggccatgccggcgccgttgtaccgccatcgctacgggacgtga
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