KEGG   Micromonas commoda: MICPUN_104310
Entry
MICPUN_104310     CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
mis  Micromonas commoda
Pathway
mis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUN_104310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mis03041]
    MICPUN_104310
   04121 Ubiquitin system [BR:mis04121]
    MICPUN_104310
Spliceosome [BR:mis03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    MICPUN_104310
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    MICPUN_104310
Ubiquitin system [BR:mis04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    MICPUN_104310
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 8249449
NCBI-ProteinID: XP_002506343
JGI: MicpuN3_104310
UniProt: C1EI09
LinkDB
Position
15:242098..244380
AA seq 760 aa
MEDGEAPAASMDDFPEGMKVNTSNAGGEVSMSLEETNRVREKLGLKPLRTGESDRTKARR
EAEETERAAREADAKDAETAALAAKIAAAKEKRTMEQRNRATKQLGEAADADDDDMMAWV
NKSRKIEEKRRKEERKKAEELARKLAEQDDEAEESEGDEIYGGKDLAGMRVRHGLEDVAE
GETMILTLKDSSILDDKLQGINEEDDELENVNVAQERKRQKAKKAATKRSDNPFGADDED
AGKKILSKYDEEDEDEGLTLDAAGAIDAAEEKRKADIKRRLAASLGGVSVNAVAETADVR
KREMSEFMSAAEVAEEAAAKFNKPKKKRRKKLREKKFDISEIENDHLAQAAQEKQEAAAE
PERARGRFRNDAGEEERKLMGFQNALNKAKIKTDERILAEMAGDVEDEDTELAMALERTK
RLAERGVGARSDVDVARVAAARRATDAPDVGERGASGEGMVFNDVQEFVHGINVEDKRAT
RSEAAAAGDMPPVPPPPPGSGDMPPVPPPPPGSDVDGMPPVPPPPPSGVGAEEEHEDDEV
NPLDGVQANPMGSGLAATLALLKETGKLHENDMWDGRTNDKKPLALMRVREAAEITGAEF
EGHKFDFKLDRYDEFGRKMTPKEAFRELCHRFHGIEPGRAKKEKRLRAYQEEVKAKKMRE
GESVTGSVDKMKMAQKATAAPYVVLSGKIHAGQISDAVSKYATAGLEDDAGKETGKASPA
PGGAKRGGGGGDGGGGNAMDPTTLPMLTGAEKVKFMMSKK
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggaggatggcgaggccccggcggcttccatggacgacttccccgagggcatgaaggtc
aatacgtctaacgcgggcggggaggtctccatgtccctggaggagaccaaccgagtccgc
gagaagctgggattgaagcccctccgcacgggcgagagtgatcggaccaaggcgcgtcgc
gaggccgaggagacggaacgcgcggcgcgggaggcggacgccaaggatgcggaaaccgcc
gcgctcgccgccaagatagccgcggccaaggagaagcggaccatggagcagcgcaaccgc
gccaccaagcaactcggcgaggcggcggacgccgacgacgacgacatgatggcttgggtg
aacaagagccgcaagatcgaggagaagcggcgcaaggaggaacgcaaaaaggcggaggag
ctcgcgcggaagctcgcggagcaggacgacgaggcggaggagtcggagggcgacgagatc
tacggcggcaaggacctcgcgggcatgagggttcgtcacggcctggaagacgtcgccgag
ggcgagaccatgatcttaaccctgaaggactcgtccatcctcgacgataagctccagggg
atcaacgaagaggacgacgagctcgagaacgtcaacgtggcccaggagcgcaagcggcag
aaggcgaaaaaggctgcgacgaagcgaagcgacaacccttttggcgccgacgacgaggac
gccggcaagaagatactctcaaagtacgacgaggaggacgaggacgagggtctcactctg
gacgcggcgggcgcgatcgacgccgcggaggagaagaggaaagccgacatcaagcgcagg
ctcgccgcctcgctcggcggcgtttccgtcaacgccgtggctgagacggctgacgtgcgg
aagagggagatgtcagagttcatgtccgcggcggaggttgccgaggaggcggcggccaag
tttaacaaaccaaagaagaagcgacggaagaagctgcgggagaagaagtttgacatctcc
gagattgagaacgaccacctcgcgcaggcggcgcaggagaagcaggaggcagccgccgag
cccgaaagggcccgaggccgtttccggaatgacgcgggggaggaggagaggaaactgatg
gggtttcagaacgcgctcaacaaggccaagatcaagacggacgagcgcatcctcgccgag
atggccggcgacgtcgaagacgaggacacggagctcgcgatggcgctcgagcggaccaag
cggctcgcggagaggggcgttggggctcgaagcgacgtcgacgtcgcgagggtggcggcg
gctcggcgggcgacggatgcgccggatgttggggagcgaggcgcgagcggcgagggcatg
gtgttcaacgacgtgcaagagttcgttcacgggatcaacgtggaggacaagagggcgacg
aggagcgaggcggccgccgcgggcgacatgcccccggttccgcccccgccacccggctcg
ggcgacatgccgcccgttcctcccccgccgcccggctcggatgtcgacggcatgccgccc
gttcctcccccgccgccctcgggggttggcgccgaggaggaacatgaggatgacgaggtg
aaccccttggacggcgtgcaggccaaccccatgggaagcggtttggcggccactctggcc
ctgctgaaggagaccggtaagctgcacgagaacgacatgtgggacgggcgcaccaacgac
aagaaacccctggcgctcatgcgcgtgagggaagcggcggaaatcaccggcgcagagttt
gagggccacaagttcgacttcaagctggacaggtacgacgagtttgggcgcaagatgacc
ccgaaggaggcgttccgcgagctgtgccacaggttccacggcatcgaacccggccgagcc
aagaaggagaaacggctgagggcgtatcaggaggaggtcaaggcgaagaagatgcgggag
ggcgagtcggtgaccgggtccgtggataagatgaagatggcgcaaaaggcaaccgcggcg
ccgtacgtggttttatcgggcaagatccacgccggtcagatctcggacgcggtgagcaag
tacgccacagccgggctggaggatgacgccggcaaggagacgggtaaggcctcgcccgca
cccggcggcgccaagcggggcggtggtggtggtgacggcggcggcgggaacgcgatggac
ccgaccacgctgccgatgctcaccggtgcggagaaggtcaagttcatgatgtcgaagaag
taa

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