Micromonas commoda: MICPUN_104780
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Entry
MICPUN_104780 CDS
T02695
Symbol
SSIV
Name
(RefSeq) glycosyltransferase family 5 protein
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
mis
Micromonas commoda
Pathway
mis00500
Starch and sucrose metabolism
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
Module
mis_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MICPUN_104780 (SSIV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mis01003
]
MICPUN_104780 (SSIV)
Enzymes [BR:
mis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
MICPUN_104780 (SSIV)
Glycosyltransferases [BR:
mis01003
]
Polysaccharide
Storage polysaccharide
MICPUN_104780 (SSIV)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
8242312
NCBI-ProteinID:
XP_002500693
JGI:
MicpuN3_104780
UniProt:
C1E2P6
LinkDB
All DBs
Position
3:1432666..1434405
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AA seq
579 aa
AA seq
DB search
MAGIEAFFNQPQQKPREPIGPGELLSPPDEAAIKWPEPNENPKFWERPPIRMPENLDPKT
CEITTKPLHVVHVTAEMAPVAKVGGLGDVVTGLARAHLCQGHNVEVCIPYYSSLEGKVED
VQHVMDFDVPKGEQWEWDGEKEIRMSDFQWSMYSGKIGGCPIIALRPAFREGSNLFVGQR
IYGGSYNEAEAYLSFCRASLECLRVTGRDPNVIHVHEWQCSAVAMLYWDVYHAQGLLNNA
KVMLTIHNMDNTGECREEEFMATGVPGSEFNTLEKAMDERTIGHNPERLCLMKGAIVYSN
YVTTVSPTYAREALNGSAGFLGKTLMKERTKFSGVINGVDTEIWDARLDNFLPANFKPGT
MEGKALCKKYVQMGLGMNVDPHKPLVVCISRLVPQKGINLIEHAIPRTKEKGGQFVLLGS
GHSDPPFQRLAESVYKNDKDVKLLIFYSDALSHLLYAAADCVLVPSMFEPCGLTQMIAMC
YGALPIVRKTGGLADTVHDVDDPSMSDSKKNGFVFEGADNNSLDGALDRAMRYYHERKPW
WKGMQEQVMDIDNSWERAGEEYVQLYRMITGIREDNDHY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgaggcgttcttcaaccagccgcagcagaagccccgcgagcccatcggc
ccgggcgagctcctgtcacccccggacgaagccgccatcaagtggccggagcccaacgag
aacccaaagttctgggagcgtccgccgattcgcatgccggaaaacctcgacccgaagacg
tgcgagatcaccaccaagccgctgcacgtcgtgcacgtcaccgcggagatggcgccggtg
gcgaaagtcggagggctcggcgacgtcgtcaccggcttggcgcgagcgcacctgtgccag
ggccacaacgtcgaggtgtgcatcccgtactactcgtcgttggagggtaaggtggaggac
gtgcagcacgtgatggactttgacgtgccgaagggcgagcagtgggagtgggacggcgag
aaggagattcggatgagcgactttcagtggtccatgtacagcgggaagatcggcggctgc
ccgatcatcgcgctccggccggcgtttcgcgagggatctaacctgttcgtcggtcagaga
atctacggcggctcctataacgaggccgaggcgtacctgtccttctgccgagcgtcgttg
gagtgcctgagggtcacggggcgcgaccccaacgtcatccacgtgcacgagtggcagtgc
agcgccgtcgcgatgctctactgggacgtctatcacgctcagggcttgctgaacaacgcc
aaggtgatgctgacgatccacaacatggacaacaccggcgagtgcagggaggaggagttc
atggcgacgggcgtccccggaagcgagttcaacacgctggagaaggctatggacgagcga
accatcgggcacaacccggagcgactgtgcctgatgaagggagccatcgtctactccaat
tacgtcacgaccgtgtccccgacgtacgccagggaggcgctcaacggcagcgccggattc
ctgggtaagacgctcatgaaggagcggacgaagttcagcggggtgatcaacggcgtcgac
actgagatttgggacgcgaggctggacaacttcctcccggccaacttcaagcccggcacg
atggaaggcaaggcgctgtgcaagaagtacgtgcagatgggcctcggcatgaacgtcgac
ccgcacaagccgctggtggtgtgcatatcccgcctggtgccgcagaagggaatcaacctc
atcgagcatgcgatcccgcggaccaaggagaagggcgggcagtttgtcctcctcggttcc
ggacattccgatccccctttccagaggctggcggagagcgtctataagaacgacaaggac
gtcaagctcctcatcttctactccgacgcgctctcgcacttgctctacgcggcggcggac
tgcgtgctggtgccgtccatgttcgagccgtgcggattgacccagatgatcgcgatgtgc
tacggggctcttcccatcgttcgcaaaaccggcggcctcgcggacaccgtgcacgacgtc
gacgatccgtccatgtccgactccaagaagaacggtttcgtgttcgagggtgcggacaac
aacagcctggacggcgcgctggaccgcgccatgcggtattaccacgagaggaagccgtgg
tggaaggggatgcaggagcaggtgatggacatcgacaattcgtgggagcgagcgggcgag
gagtacgtccagctgtaccgcatgatcacgggaatcagggaagacaacgaccattactga
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