Micromonas commoda: MICPUN_104934
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Entry
MICPUN_104934 CDS
T02695
Name
(RefSeq) SNF2 super family
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
mis
Micromonas commoda
Pathway
mis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MICPUN_104934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_104934
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
MICPUN_104934
SWR1 complex
MICPUN_104934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
8246402
NCBI-ProteinID:
XP_002504538
JGI:
MicpuN3_104934
UniProt:
C1EBX6
LinkDB
All DBs
Position
9:complement(391574..397573)
Genome browser
AA seq
1999 aa
AA seq
DB search
METLQEELDRAPLDPDAVRAEVSALEKESEIPVHMLLKRYGAPKEEVEAASVKAESEAGG
DDEDEDTADDSEGSFNEDDDSDDDEDDDDEDDEDDEDDDDDDAMPPPGSQPDSRRVSLTI
NGVERPPDKVGALPVVFETPEEAKAAAIEEGKRIRYEDGVMDRAWDIMARPPLMKPVPPF
PEPARNKTHWDHLLEEMKWLSGDFVRERKFRAKLARKAVYAVARSNLDLESRVIKREQDL
LAAQRKTARNIGNEIMHFWIKIEKVVRFKAQAKVDSKRKQVMDKHLDFLLGQTERYSTML
AGKLTGEEEGALEGGEMKALPAPAQKSKPNPMPSVPEVKEEEDEDGDDFVAPDEDDMDDE
ETLEEEMRRAQAEGDDEDNDKEMADLAADAEVPIEELLRRYREMEEAEEKEKASKVSKKS
VEIEDHEPTPMDTTCSPGEETRETTFADIVGEAGAVTGTSKRGQRGGKPAPAAAEALDDN
DDFKIGDGEEEEDDEETLEEEMRRAQAEGDDDDHEKEMNDLAADAEIPIEELMRRYREME
AAHGGGEDLEEAEEEEGDDEEEDEEEEVEEEEEEDEPGVDALGGDDEPPMTEEQKAASRE
RRRVLDSLAGDAGSLQPKGHTLESADVKCRVPFLLKHSLREYQHVGLNWLVSCYDKALNG
ILADEMGLGKTIQTISLLAYLACNHGIWGPHLIVVPTSVMLNWEVEFKKWCPAFKLLTYF
GTAKERKLKRQGWSKPNSFHVCITTYRLITQDQKVFRRKKWKYLILDEAHMIKNWRSQRW
QTLLNFNSKRRLLITGTPLQNDLMELWSLMHFLMPHVFQSHSEFKNWFSSPLSGMVEGGE
GINMDLVSRLHGVLRPFLLRRLKSEVEKNLPGKTEHVVHCGLSKRQRRLYEEYMASSDTS
TTLSSGNLLGIINCLMQLRKVCNHPDLFAGRPIVSAFDMLPGVSIAVPSVVQNAARTLHE
DPFRSKWFAPRGLHLLTIEDVNADAGGYGYASGDGWGCREALRRMAPVHEVEAALAQVTP
KPSQRLGRMTQNADAAVRLFAEARAAAAKVERREVARRLALAAADAASRIPTYGTDLRRA
CVVRHPVHHCHLIERTFGVGPFATAPALLSAVKTYEARASDGADLVTAFMFAIPKARAPT
PTMTCSAPSASVRAASRRIDAWAQKVGAPALAPLRLAQVRQQLFFPDRRLVQFDCGKLQA
LATLLRMKKSGGHKVLIFTQMTKMLDILEAFLNLYGYPYCRLDGTTRPEQRQIMMQRFNT
DPRLFAFILSTRSGGFGINLTGADTVVFYDSDWNPAMDQQAQDRAHRIGQTREVHIYRLV
CKGTIEENILRKSMQKRELDHFAIQAGNFNTEQFKKIAEAKARGETAPDGSGPGDEDEDK
KRRADVVGGDAGFAAMNIFDKAMGAMGKSKPDNNKNGGGGGGDGTNEDDEVARLMDEAQD
DADKAAAAAEAAGDADEAAEFGDDIREKDNPDTEDDDKSGGTSDQKSNKLKRVASASDGR
SLAKASANKDEVTPATPTQKVGDADNGVGGDLSMVAINTSLEGDDQFAQDMMRKVQMSAS
KGEAIEQQLRPVERYAVRYLEETVRILDDVGIDADAVVDIEEKAWELDQLEKQKAAAERE
VDDDEEGLVVEGWETGAADEEYRKKVEQAQEEARLQAEWERLEAERWAAMYAVPSAEDRS
AAAAAAAATGAGGGGGLAGAIIGAKVPKGKRSSRDNTPGGTPRAGSPAPEGAAPALKVKF
KLGPSLLGGGVKRECEESTDPELAHAHKKHKHKHKDETPEERAERKRMRKLTKEGAIAGG
PQAQTPVKPNLTTAAAGAAVLQQSPTMTNPMEVSPGAGNNPMGYPAGMIPADFTIKEDAV
ISTLVLTMGDRAFSLGSELLSNNGPFIRPPAACKDRFRKLIALHGSSLAADVGSTWMASG
QLRVTPELARALASKVANDAFPGDASSASPTGDGGPRRAPGPIRALLGAVQAMKASGDDA
TGVGKQGVVESVRNIFKVV
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctgcaggaggagctggatcgcgcgccgctcgatcccgacgcggtccgcgcg
gaggtgagcgcgctggaaaaggagagcgagatccccgtgcacatgctgttgaagcgctac
ggcgcgcccaaggaggaggtcgaagccgcctccgtcaaggccgagtcggaagccggcggc
gacgacgaggatgaggacaccgccgacgactccgaaggatccttcaacgaggacgacgac
tccgacgacgatgaggacgacgacgatgaggacgatgaggacgatgaggacgatgacgat
gacgacgcgatgccgccgccggggagccagccggactcgcgccgcgtctccctcaccatc
aacggcgtggagcgccccccggataaggttggcgcgctccccgtcgtgttcgagaccccg
gaggaggccaaggcggcggcgatcgaggagggcaagcggatcaggtacgaggacggcgtg
atggaccgcgcgtgggacatcatggcgcggccgccgctcatgaaaccggtgccgcccttc
cccgaacccgctcgcaacaagacgcattgggatcacctgctggaggagatgaagtggctc
tccggtgactttgtccgggagcgtaagttccgcgctaagctcgcgcgtaaggctgtgtac
gcggtggccaggtccaacctcgacttggagtcgcgggtgatcaagcgcgagcaggactta
ctcgccgcgcagcggaagacggcgcggaacatcggcaacgagatcatgcacttttggatc
aagattgaaaaggtggtacgattcaaggcgcaggcaaaggttgactccaagcgtaagcag
gtcatggacaagcacctcgatttcctcctgggtcaaaccgagaggtactcgaccatgctc
gcgggtaagctgacgggcgaggaggaaggcgcgctcgaaggtggtgaaatgaaggcactg
cctgctccggctcaaaagtcaaaacccaatccgatgccctcagtccccgaggtcaaggag
gaagaggacgaagacggtgacgacttcgtcgccccagacgaagacgatatggacgacgag
gagaccctggaggaagagatgcgacgggcgcaggccgagggcgacgatgaagacaacgac
aaggagatggcggatctagccgccgacgccgaggtgccaatcgaggaattactccgccgg
tatcgcgagatggaggaggcggaggagaaagagaaggcttccaaggtttccaaaaagtcg
gtcgagatcgaggatcacgaacccacgccgatggacaccacgtgttcgccgggtgaggag
accagggagacgaccttcgcggacatcgtcggagaagccggagctgtgactggaacgtcc
aagcggggccagcgaggcgggaagcccgcgccggccgccgccgaggccctggacgacaac
gacgatttcaagatcggagacggcgaggaagaagaggacgatgaggagactctggaggag
gagatgcgacgggcgcaggctgagggtgacgacgacgatcacgagaaggagatgaacgac
ctcgccgcggacgcggagattccaatcgaggagctgatgcggcggtaccgggagatggag
gctgcgcacggcggcggcgaagatttggaagaagccgaagaggaggaaggtgacgacgaa
gaggaggacgaggaggaggaagtcgaggaggaggaggaggaggacgagcccggtgtggac
gccctcggcggcgacgacgagcccccgatgactgaggaacaaaaagccgcgtctcgcgag
cgccgcagagtcctcgactccctcgccggggatgcgggttccttgcagcccaagggacac
actctcgagtccgcggacgtcaagtgtcgggtcccgttcctgttgaagcactcgctgcgg
gagtatcagcacgtgggactcaactggctggtgagctgctacgacaaggctctcaacggg
atcctcgccgacgagatgggcttgggaaaaaccatccagaccatctcgttgctcgcgtat
ctggcgtgcaaccacggcatatgggggccgcatctcatcgtggtgcccacgtctgtgatg
ttgaactgggaagtcgagttcaagaagtggtgcccggcgtttaagctgttgacgtacttt
ggcactgcaaaggagcggaagctgaaacggcagggttggtccaagcccaactcgttccac
gtgtgcatcaccacctacaggctgatcacccaggaccaaaaggtgttccgtcgtaagaaa
tggaagtacctgatcctggacgaggcgcacatgatcaagaactggcggtcgcagcgttgg
cagacgctgctcaactttaacagcaagcgaaggcttctgatcacggggacgccgctgcag
aacgacctgatggagctctggtcgttgatgcacttcctcatgccgcacgtgttccagtcg
cacagcgaattcaagaactggttctcgtcgccgctcagcgggatggtcgagggcggcgag
ggcatcaacatggacctggtctcgaggctccacggcgtgctccgcccttttttacttcga
aggctcaagtccgaggttgagaagaacctcccgggtaagaccgagcacgtcgtgcactgc
gggctgtccaagcgtcagcgtcgcctgtacgaggaatacatggcatccagcgatacgtcc
accacgctgtccagcggcaacttgttgggtatcatcaactgcctgatgcagctgcgaaag
gtttgcaaccacccggaccttttcgccgggcggcccatcgtctcggcgtttgacatgctc
cccggcgtcagcatcgcggtcccgtccgtcgtgcaaaacgcggcccgcacgttacacgag
gatccgttccggtccaagtggttcgcgccccgggggttacacctgctgaccatcgaggac
gtcaacgcggacgccggcggatacggctacgcctccggagacggctgggggtgtcgcgag
gcgcttcgtcggatggcgcccgttcacgaggtggaagccgccctggcgcaggtcacgccc
aagccgtcgcaacgactgggtcgcatgacccaaaacgcggacgcggcggtcaggctcttc
gccgaggcgagagcggcggcggcgaaggttgagaggcgcgaggtcgcgaggcggctagct
ctcgccgccgccgacgccgcgtcgcggatcccgacgtacggcacagaccttcgccgcgcg
tgcgtggtgcgccacccggtgcatcactgccacctcatcgagcgtaccttcggggttggg
ccgttcgcgacggctcccgcgctgttgtccgcggtcaagacgtacgaggctagggcatcg
gacggagccgatttggtgacggcgtttatgttcgcgattccgaaggcgagggcgccgacg
ccgacgatgacgtgcagcgcgcccagcgcatcggtccgcgcggcgtcgcgacggatcgac
gcgtgggcgcaaaaagtcggcgcccccgcgctggcgccgcttcgcctggcgcaggttcgc
cagcagctattcttcccggacaggaggttggtgcagtttgactgcgggaagctgcaggcg
ctcgcgacgctccttcggatgaagaaatccggcgggcacaaggtgctcatcttcacgcag
atgaccaagatgctcgacatcctcgaggcgttcctcaacctctacggctacccttactgc
aggctcgacggcaccacgcggccggaacagaggcagatcatgatgcagcgattcaacact
gacccgcgccttttcgcgtttatcctatccacgagatcgggcggctttgggatcaacctc
acaggcgccgacaccgtcgtcttctacgattccgattggaacccggcgatggatcagcag
gcgcaggatcgcgcgcatcgcatcggccagacccgcgaggttcacatataccgcctggtg
tgcaaggggaccatcgaggagaacattttgcgcaaatcgatgcaaaagcgcgagctggac
cacttcgcgattcaagcgggtaacttcaacaccgagcagttcaagaagatcgcggaggcc
aaggcgaggggtgagacagcgcccgacggctcaggtcccggagacgaagacgaagataag
aagcgtcgcgcggacgttgtcggtggcgacgcgggctttgcggcgatgaacatcttcgac
aaggccatgggcgcgatgggcaagtccaagccggacaacaataaaaacggcggtgggggc
gggggcgacggcacaaatgaggatgacgaggtcgccagactcatggacgaggctcaggac
gacgctgacaaggccgccgcggccgctgaggctgccggtgacgctgacgaagccgccgag
tttggtgatgacatccgcgagaaagacaaccccgacacggaggatgacgataaaagcggg
ggaacctccgaccaaaaatccaacaagctgaagcgcgtggcttcggcgtccgacggcaga
tcgctcgccaaggcgtccgcgaacaaggacgaggtcacgcccgcgacccccacgcaaaag
gttggcgatgctgacaacggcgtcggcggcgacttgtccatggttgccatcaacacgtct
ctggaaggggacgaccagttcgcgcaggacatgatgcgcaaggtgcagatgtccgcgagc
aagggcgaggcgatcgaacagcagctccgtcccgtggagcgttacgccgtgcgttatctc
gaggagacggttcgtatcctggacgacgtcggcatcgacgcggacgccgtcgtggacatc
gaggagaaggcgtgggagctcgaccagctcgagaagcaaaaggcggcggcggagcgggaa
gtggacgacgacgaggaaggactcgtcgtcgagggttgggagacgggcgccgcggacgag
gagtaccggaaaaaggtggagcaggcgcaggaagaggcgcggttgcaggcggagtgggag
cgtctggaggctgaacgatgggcggcgatgtacgcggtgccgagcgccgaggacagatcc
gccgccgccgccgccgccgccgcgacgggcgcggggggcgggggcgggctcgcgggcgcc
atcatcggcgctaaggttcccaaggggaagcgatcgagccgggataacaccccggggggt
accccccgcgcggggtcgcccgctcccgagggcgccgccccggcgctcaaggtgaagttc
aaactcggtccctcgctcctcggcggcggggtcaaacgcgaatgcgaagagtcgacggac
cccgaactcgcccacgcgcacaagaaacacaagcacaagcacaaagacgagaccccggag
gaacgcgccgaacgcaagcgcatgcgtaagctaaccaaggagggcgcgattgcgggcggg
ccgcaggcgcagacgcccgtgaaacctaacctgacgacggcggcggcgggcgcggctgtg
ctgcagcagtccccgacgatgaccaacccgatggaggtatctcccggcgcggggaataac
ccgatggggtacccggccggcatgattccagcggacttcacgatcaaggaggatgcggtc
atatccacgctcgtgctgaccatgggcgaccgggcgttttcgcttggcagcgagttgctg
tccaacaacggtccgttcattcgccctcccgccgcgtgcaaggacaggttcaggaagctc
atcgcgctgcacggctcgtcgctcgcggcggacgtgggttccacttggatggcgagcggg
cagctgagggtcacccccgagctcgctcgcgctctcgcgtccaaggttgcgaacgacgcc
ttcccgggtgacgcgtcttcggcgtccccgactggggacgggggaccgaggagggctccc
ggtccgatccgcgcgctgctgggtgcggtgcaggcgatgaaggcgtcgggtgacgacgcg
acgggcgttggaaaacagggggtggtcgagagcgtgaggaacatcttcaaggtggtttag
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integrated database retrieval system
