Micromonas commoda: MICPUN_104984
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Entry
MICPUN_104984 CDS
T02695
Symbol
LPD_B273
Name
(RefSeq) also known as glycine decarboxylase L-protein
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mis
Micromonas commoda
Pathway
mis00010
Glycolysis / Gluconeogenesis
mis00020
Citrate cycle (TCA cycle)
mis00260
Glycine, serine and threonine metabolism
mis00280
Valine, leucine and isoleucine degradation
mis00310
Lysine degradation
mis00380
Tryptophan metabolism
mis00620
Pyruvate metabolism
mis00630
Glyoxylate and dicarboxylate metabolism
mis00640
Propanoate metabolism
mis00670
One carbon pool by folate
mis00785
Lipoic acid metabolism
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
mis01200
Carbon metabolism
mis01210
2-Oxocarboxylic acid metabolism
mis01240
Biosynthesis of cofactors
Module
mis_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mis_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MICPUN_104984 (LPD_B273)
00020 Citrate cycle (TCA cycle)
MICPUN_104984 (LPD_B273)
00620 Pyruvate metabolism
MICPUN_104984 (LPD_B273)
00630 Glyoxylate and dicarboxylate metabolism
MICPUN_104984 (LPD_B273)
00640 Propanoate metabolism
MICPUN_104984 (LPD_B273)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MICPUN_104984 (LPD_B273)
00280 Valine, leucine and isoleucine degradation
MICPUN_104984 (LPD_B273)
00310 Lysine degradation
MICPUN_104984 (LPD_B273)
00380 Tryptophan metabolism
MICPUN_104984 (LPD_B273)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MICPUN_104984 (LPD_B273)
00670 One carbon pool by folate
MICPUN_104984 (LPD_B273)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_104984 (LPD_B273)
Enzymes [BR:
mis01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MICPUN_104984 (LPD_B273)
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MICPUN_104984 (LPD_B273)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
Lys_Orn_oxgnase
NAD_binding_8
GIDA
HI0933_like
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
DAO
UDPG_MGDP_dh_N
FAD_binding_3
Lycopene_cycl
Thi4
3HCDH_N
SE
Motif
Other DBs
NCBI-GeneID:
8247818
NCBI-ProteinID:
XP_002508932
JGI:
MicpuN3_104984
UniProt:
C1FIL5
LinkDB
All DBs
Position
12:join(89023..89354,89526..90711)
Genome browser
AA seq
505 aa
AA seq
DB search
MQQALLALAPQGRRALASSTALRTIGARMFSASAATADQQDVVVIGGGPGGYVAAIKGAQ
LGLKVTCVEGRGTLGGTCLNVGCIPSKALLHASHLYHDANHTMAKHGISVGEVSIDVAKM
MEQKSKSVSGLTKGIEGLFKKNKVTYAKGWGSLTSTPGEVVVAKEDGTTQTISAKNIILA
TGSEPAALPGVEVDEETIVTSTGALDLKEVPKRMVVIGGGVIGLELGSVWSRLGSQVTVI
EFAKDICPPMDAQMRKTFERSLKKQGFKFMMEKKVTGATKTQTGVTLTVEPSAGGEAVEV
EADVVLVATGRKPFTSGLGLEAAGVEVNKRGQVVVDMHTYATSKPGVFAIGDIVEGPMLA
HKAEEEGISCVEQLAGKVGHVNYDVIPSIIYTHPEVAWCGKTEEEVKATGAEYNVGTFPF
AANSRARTNDDSEGMVKFISCKHTDKILGAHIVGPNAGELLGECVLAMEYGGSTEDIART
CHGHPTLSEAIKEAALATGGKPIHF
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggctctcctcgcgctcgcgccccagggccgccgcgccctcgcctcctccacc
gcgctgcgcaccatcggagcgcgcatgttctccgcgtccgccgcgaccgcggatcagcag
gacgtcgtcgtcatcggcggcggtccgggcggatacgtcgccgccatcaagggcgcccag
ctcggcctcaaggtgacctgcgtcgaggggcgcggcaccctcggaggtacctgcctcaac
gtgggatgcatcccgtccaaggcgctgctgcacgcgtcgcacctgtaccacgacgcgaat
cacaccatggccaagcacggcatctccgtcggcgaggtgtccatcgacgtcgcgaagatg
atggagcaaaagtccaagtccgtctcgggcctgaccaagggcatcgagggtttattcaag
aagaacaaggtgacctacgccaagggttggggatcgctcacgtccacccccggcgaggtg
gtcgtcgccaaggaggacggcaccacgcagacgatcagcgccaagaacatcatcctcgcc
acgggctccgaacccgcggcgctcccgggcgtggaggttgacgaggagacgatcgtcacc
tccaccggggcgctcgacctgaaggaggtgcccaagagaatggtcgtcatcggcggcggc
gtcatcgggctggagctcggaagcgtgtggagccgcctcgggtcgcaggtgaccgtgatc
gagttcgccaaagacatctgcccgccgatggacgcccagatgcgcaagacgttcgagcgc
tcgctcaagaagcaggggttcaagttcatgatggagaagaaggtcacgggcgcgacaaag
acgcaaaccggggtgacgctcaccgtcgaaccctccgcggggggcgaagccgtcgaggtc
gaggctgacgtcgtcctcgtcgccacgggccgtaagccgttcacctccggcctcgggctc
gaagccgccggcgtcgaggtcaacaagcgcggccaggtggtcgtggacatgcacacgtac
gcgacgtccaagccgggcgtcttcgccatcggagacatcgtggagggacccatgctcgcg
cacaaagccgaggaggaggggatcagctgcgtggagcagctcgccggcaaggtgggccac
gtcaactacgacgtcatcccgagcatcatctacacccaccccgaggtggcgtggtgcggt
aagacggaggaggaggtcaaggcgacgggagccgaatacaacgtcggcaccttccccttc
gccgccaactcccgcgcgaggaccaacgacgactccgaggggatggtcaagttcatcagc
tgcaagcacacggacaagatcctaggcgcgcacatcgtgggacccaacgcgggggagctc
ctcggcgagtgcgtcctcgccatggagtacgggggaagcacggaggacatcgcccggacg
tgccacgggcacccgacgctgagcgaggcgatcaaggaagccgcgctcgcgacggggggg
aagcccatccacttctga
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