Micromonas commoda: MICPUN_105123
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Entry
MICPUN_105123 CDS
T02695
Name
(RefSeq) vacuolar sorting protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mis
Micromonas commoda
Pathway
mis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
MICPUN_105123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_105123
Membrane trafficking [BR:
mis04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
MICPUN_105123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
8240871
NCBI-ProteinID:
XP_002499676
JGI:
MicpuN3_105123
UniProt:
C1DYE8
LinkDB
All DBs
Position
2:join(1178602..1178653,1178851..1178900,1179004..1181436)
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AA seq
844 aa
AA seq
DB search
MATMNVSAQDEQDKWLADASSLVKQYAFYMKRALDDNNLREALKQGSLMLGELRTIALSP
QKYYELYMQVWNELRHLEAFFGEEARHGKSNLELYELVQHAGNILPRLYLLITVGVVYIK
SKDGAAKDVLKDLVEMAKGVQQPIHGLFLRTYLSQASKTLLPDTGSEYEGNGGNVNDAVE
FVLQNFTEMNKLWVRMQHGGGNRDRERREKERRELRDLVGKNLLVLTQLEGMTLDLYKGT
VLPRVLEQVINCKDDIAQPYLLDALIQVFPDEFHVQTLDAFLEACPLLKPTVKIGNVLAS
LMERLASSARDNPEIVAQFVAVEAFGKLSAGCKSIIASQPSMDAHDRLQMHAALMGFVTA
VHRDRLDYVDDVLGACADALNAPGGGDEKDSKENSSDERVDRGGIDGGAEDAGPPMIVSD
QKGVRQLHALLTVPLDTYDVVSVLGLSNYPRVMSLLQPANLRQMAMTIVKSVIREPEGAV
SDATQAETLFRFISVLIKDREGVAEEVDEEDFEEEQNAVARLVHALQSGDSDTQYRLLVA
SRKHFGQGGPRRLKHTLPPLAHEAMRLGRSLLARARADSGSGDSGAAAAAAAATGPMGPA
LKKILQFLHQTISALAAAPVSRHEPAMRLFLEAAQLADASGMEPVAYEFFERAMTIYEDE
ISDSAAQRSALSCVVGALHSCVGFTAESRESLVHKTTAYSARLLKKPDQVRAVSDCAHLF
WGPDGVDGAARDATSTVTCLKKALKIAGGVQQASLGGVGGGGGDALRLFIEVLNKYLYFF
ERGCPGVDASILQGLLEIINGELAGEEHGVAPDIQAYYGATVRHIKHQKLKGGEIGARYQ
AISL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggccacgatgaacgtgtccgctcaggatgagcaggataagtggctcgcagatgcgtcg
agcctggtgaaacagtacgctttctacatgaagcgcgcgctggacgacaacaacctgcgc
gaggcgctcaagcagggctcgctcatgctcggcgagctgcgtacgatcgcgctgagcccg
cagaagtactacgagctgtacatgcaggtgtggaacgagctgaggcatctggaggcgttc
ttcggagaggaggccaggcacggcaaatccaacctggaactctacgagctcgtgcagcac
gcggggaacatcctaccgcgcctgtacctcctcatcaccgtcggcgtcgtgtacatcaag
agcaaggacggggccgcgaaggacgtgctcaaagatctcgtggagatggccaagggggtg
cagcagcccatccacgggctgttcctcaggacgtacctcagccaggcgagcaagacgctg
ctgccggacaccggcagcgagtacgagggcaacggcgggaacgtcaacgacgcggtcgag
tttgtcctccagaacttcacggagatgaacaagctgtgggtgcggatgcagcacggcggc
ggaaatcgcgaccgagagagaagagagaaggagcgccgcgagctgcgagacttggtgggt
aagaacctgctggtgctgacgcagctggagggcatgacgctcgacctgtacaaagggacc
gtcctgccgagggtcctcgagcaggtcatcaactgcaaggacgacatcgcgcagccgtac
ctgctggacgcgctcatccaggttttccccgacgagtttcacgtccaaacgctggatgcg
ttcctagaggcgtgccccttgctcaagcccacggtgaagatcggcaacgtcctcgcgtcg
ctgatggagaggctcgcgtcctccgcgcgggataacccggagattgtggcgcagtttgtg
gcggtggaagcgtttggcaaattgagcgcggggtgcaagagcatcatcgcctcgcagccg
tcgatggacgcccacgacaggctgcagatgcacgcggcgctcatggggttcgtgacggcc
gtgcacagggaccggttggactacgtggacgacgtgctgggcgcttgcgcggatgctctc
aacgcgccaggcggcggcgacgagaaggattcaaaggaaaattcatcggatgagcgcgtc
gaccggggcgggatcgatggcggcgccgaggacgccggcccgccgatgatcgtctcggac
cagaagggcgtgcgtcagcttcacgcgctgctcaccgtgccactcgacacctacgacgtc
gtgtctgtgctcggcctttccaactaccctcgggtgatgtcgctgctgcagccggcgaac
ctgcggcagatggcgatgaccatcgtcaagtcggtgatccgcgagccggagggcgcggta
tccgacgcgacgcaggcggagactctgttcaggttcatctcggtcctgatcaaggaccgg
gagggcgtcgcggaggaggttgacgaggaggatttcgaggaggagcaaaacgcggtggct
cggctcgtgcacgcgctgcaatcgggggacagcgacacccagtaccgactgctggtggcg
tcgaggaagcatttcggacagggcggccccagacggctgaagcacacgctcccgccgctc
gcgcacgaggccatgcgcctcggacggtcgctgctcgcgagggcgagagccgattcgggt
tccggcgattcgggagcggcggcggcggcggcggcggcgacgggcccgatgggccccgcg
ctgaagaagatcctccaatttctccaccagaccatctccgcgctggcggcggcgccggtg
tcgaggcacgagccggccatgcgattgttcctcgaggcggcacagctggcggacgcctcc
gggatggagcccgtcgcgtatgaattttttgagcgcgcgatgacgatttacgaggatgaa
atctcggactcggcggcgcagaggagcgcgctgtcctgcgtcgtcggggccctgcactcg
tgcgtcgggttcaccgccgagtcgcgcgagtccctcgtgcacaagaccaccgcgtacagc
gcgaggttgctcaagaagcccgatcaggtgagggcggtttcggactgcgcgcacctgttt
tggggccccgacggcgtcgacggagccgcgcgggacgccacctcgacggtgacgtgcctc
aagaaggcgctgaagatcgcgggtggggtgcagcaggcgtcgctgggcggcgtcggaggc
ggcggcggggacgcccttcggctgttcatcgaggtgctgaacaagtacctctactttttc
gagcgaggctgccccggggtggacgcgtcgatcttgcagggactgctggagatcatcaac
ggcgagctcgcgggggaggagcacggggtggcgccggacatccaggcgtactacggcgcg
acggtgaggcacatcaagcaccagaagctgaagggtggggagatcggggcgaggtaccag
gccatctcgctgtga
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