Micromonas commoda: MICPUN_105208
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Entry
MICPUN_105208 CDS
T02695
Name
(RefSeq) predicted protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_105208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_105208
03110 Chaperones and folding catalysts [BR:
mis03110
]
MICPUN_105208
03029 Mitochondrial biogenesis [BR:
mis03029
]
MICPUN_105208
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_105208
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MICPUN_105208
Messenger RNA biogenesis [BR:
mis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MICPUN_105208
Chaperones and folding catalysts [BR:
mis03110
]
Heat shock proteins
HSP60 / Chaperonin
MICPUN_105208
Mitochondrial biogenesis [BR:
mis03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MICPUN_105208
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MICPUN_105208
Exosomal proteins of other body fluids (saliva and urine)
MICPUN_105208
Exosomal proteins of breast cancer cells
MICPUN_105208
Exosomal proteins of colorectal cancer cells
MICPUN_105208
Exosomal proteins of bladder cancer cells
MICPUN_105208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8241083
NCBI-ProteinID:
XP_002499889
JGI:
MicpuN3_105208
UniProt:
C1DZM8
LinkDB
All DBs
Position
2:complement(join(172862..174379,174545..174585,174691..174868,175200..175229))
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AA seq
588 aa
AA seq
DB search
MQASPLAARTALAGKATTARASRAVRVRGATLKVRADAKQLTFDMKSRMKIQEGIDIVAD
AVGVTLGPRGRNVVLAEKVGMPQVINDGVTIARAIELPDPVQNAGAQLIKEVAGRTNDSA
GDGTTTSSVLAREMIRLGLQSVTAGANPISINRGIDKTRRYLTDKLEEMAKPINGSADIK
AVASISAGNNDEIGQMIAEAIEKVGADGVLSIENGSGLETIVEVEEGMEIDRGYISPQFV
TNQEKLTVEFDGARVLVTDEKIESIKDLVPILEQVSQSGGDPLLIIAEDVAGEALATLVV
NKIRGVLNVAAIKAPGFGERRKALLQDIAIVTGSTFLAKDLGMGAASATMETLGYARKVT
ISNGTTTLIADSASREEIDIRVAQLKKELAESDSIYDTQKLSERIAKLAGGVAVIKVGAA
TETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSLMCDEFKETLTDPEEKLGAEI
VQKALVAPCRLIANNAGIEGDVIVEKVLNSEWEMGYNAMTGEFVDMMEAGVIDPKKVTRS
GLMNSCSIAGMVLTTQAVITDIPKKQAAAPMGGMNPAMDPNAMGNFSL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctctcccctcgccgcccgcacggctctcgcgggcaaggcgaccaccgcccgc
gcctcccgcgcggtccgcgtccgcggcgcgaccctcaaggtccgcgcggacgccaagcag
ctcaccttcgacatgaagtcccggatgaagatccaggagggcatcgacatcgtcgccgac
gcggttggcgtcaccctcggcccccgaggccgtaacgtcgtgctcgccgagaaggtcggc
atgccccaggtcatcaacgacggcgtcaccatcgcgcgcgccatcgagctccccgacccc
gtccagaacgccggcgcccagctcatcaaggaggtggcgggccgcaccaacgattccgcc
ggcgacggcaccaccacctcgtcggtgctggcgagggagatgatccgtctcgggctccag
tccgtcaccgcgggcgcgaaccccatctccatcaaccgcggcatcgacaagacccgcagg
tacctcaccgacaagctcgaggagatggccaagcccatcaacggcagcgccgacatcaag
gcggttgcgtccatctccgcggggaacaacgacgagattggccagatgattgccgaggcg
atcgagaaggttggcgccgacggcgtgctctccatcgagaacggcagcggtctcgagacg
atcgtcgaggtcgaggagggcatggagattgaccgcggctacatctccccccagtttgtc
accaaccaggagaagctcaccgtcgagtttgacggcgcgcgcgtcctcgtgaccgacgag
aagatcgagtccatcaaggatctcgtccccatcctcgagcaggtttcccagtccggcggc
gatcccctcctcatcatcgccgaggacgtcgccggcgaggcgctcgccaccctcgtcgtc
aacaagatccgcggcgtgctcaacgtcgccgccatcaaggcgccgggtttcggcgagcgc
cgcaaggctctcctccaggacatcgccatcgtcaccggctccaccttcctcgcgaaggac
ctcggcatgggcgccgcgtccgccaccatggagaccctcggctacgcccgcaaggtgacc
atcagcaacggcaccaccaccctcatcgccgactcggcgtctcgcgaggagattgacatt
cgcgtcgcgcagctcaagaaggaactcgccgagtcggattccatctacgacacccagaag
ctctccgagcgcatcgcgaagctcgccggcggcgtcgcggtcatcaaggttggcgccgcc
accgagacggagctcgaggaccgcaagctgcgcatcgaggatgccaagaacgccaccttc
gccgccatcgaggagggcatcgtgccgggcggcggcgcggcgctggttcacctctccctc
atgtgcgacgagttcaaggagacgctcaccgatcccgaggagaagctcggcgcggagatt
gtccaaaaggctctcgtcgcgccctgccgcctgatcgccaacaacgccggcatcgagggc
gacgtcatcgtcgagaaggttctgaacagcgagtgggagatgggctacaacgccatgact
ggcgagtttgtcgacatgatggaggcgggcgtcatcgaccccaagaaggtgaccaggtcc
ggcctcatgaactcgtgctccatcgccggtatggtgctcaccacccaggcggtcatcacc
gacatccccaagaagcaggccgcggcgcccatgggtggaatgaacccggccatggacccc
aacgccatgggcaacttctccctgtaa
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