Micromonas commoda: MICPUN_105261
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Entry
MICPUN_105261 CDS
T02695
Name
(RefSeq) predicted protein
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_105261
Enzymes [BR:
mis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
MICPUN_105261
Ubiquitin system [BR:
mis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
MICPUN_105261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
zf-C3HC4_3
zf-Nse
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
8241638
NCBI-ProteinID:
XP_002500880
JGI:
MicpuN3_105261
UniProt:
C1E1A7
LinkDB
All DBs
Position
3:complement(join(459947..461014,461189..461536))
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AA seq
471 aa
AA seq
DB search
MVEVGAPGAAAHAVAFCRACTCAFPVVLLVFLAAFTSLPGRYDSHVVVRSYAGYLPVVKD
EPAVFGPRVPADGVTARLEEASPKEACEALTNKYEGRWIALVQRSFGTEKCDFVTKVRNA
EMAGAVAVVVFDNVDGPLIPMAKKNEDNDVNVPSVFVSKESGEALETLLNDPKHGKTVVV
TLESPDSPFDDWPNVATSACVTFGALCVLLSVVLVLKRREQAHLAAMAAQRPPETRLLSA
EEVAAVAKTAVFSSQERVLSFLRGATCGGAHASAGDGDGEDDKLVVDNGTGDTCAVCIED
YESGDELRALDCGHAFHKDCIDPWLITKRACCPVCKHVIAPPPPPENVPDSRRRRRSRWS
VLSNASVATVGGAESADESDLEAPLLPASSPARSLRRGVMRWLTRRTAAGHPDASPAVSP
DSDADDSDPGGVDDGGDESTGPGGGEEGPAGGDLEAGEARAGGADGTDGEQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaggtgggagcgccgggcgcggccgcgcacgccgtggcgttctgccgcgcgtgc
acctgcgcgttccccgtggtcctcctcgtcttcctcgccgcgttcacctccctgcccggg
cgctacgactcgcacgtcgtcgtccggagctacgccgggtacctgcccgtggtgaaggac
gagcccgccgtgttcgggccgcgcgtgcccgcggacggcgtgaccgcgcggctcgaggag
gcgtcgccgaaagaggcgtgcgaggccctgacgaataagtacgaggggcggtggatagcc
ctcgtgcagcgctccttcggaacggagaagtgcgacttcgtcaccaaggtgagaaacgcg
gagatggcgggcgccgtcgcggtcgtcgtcttcgacaacgtcgacggcccgctgataccc
atggcgaaaaagaacgaggacaacgacgtgaacgttccatccgtcttcgtctccaaagaa
tcaggcgaggcgctggagactttactgaacgacccgaagcacggcaagacggtggtggtc
accctggaatcgccggactcgccgttcgacgactggccgaacgtggcgaccagcgcgtgc
gtcaccttcggcgccctgtgcgtcctgctctccgtcgtcctcgtgttaaagcggagggag
caggcgcacctcgcggcgatggctgcgcaaaggccgccggagacgcggctgctcagcgcg
gaggaggtggccgccgtggccaagaccgcggtgttctccagccaagagcgcgtgctgagc
ttcctgcgcggggctacctgcggcggggcacatgcatccgcgggggatggagacggcgag
gacgataagctcgtggtggacaacggcaccggcgacacgtgcgcggtgtgcatcgaggat
tacgagagcggcgacgagctccgagcgttggactgcggccacgcgttccacaaggactgc
atcgacccctggctcatcaccaagcgcgcgtgctgccccgtgtgtaagcacgtcatcgcg
ccgcccccgccgccggagaacgttccggacagtcggcggcgcaggcggagcaggtggtcg
gtgctgagcaacgcatcggtggcgacggtaggcggggcggaatcggcggacgagtcggac
ctcgaggcgcccctgctgcccgcctcgtctccggcccggtcgttgcggcggggtgtgatg
cgatggctgacgcggcggacggccgccggtcatccggacgcgtcgccagctgtgtctccc
gactcggacgccgacgattcagacccggggggggtcgacgacggaggcgacgaatcgacg
ggacccggcgggggtgaggaagggccggcgggaggggacttggaggctggcgaggcgcgg
gcgggtggcgcggatggaacggacggggagcagtga
DBGET
integrated database retrieval system
