Micromonas commoda: MICPUN_105511
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Entry
MICPUN_105511 CDS
T02695
Name
(RefSeq) predicted protein
KO
K07466
replication factor A1
Organism
mis
Micromonas commoda
Pathway
mis03030
DNA replication
mis03420
Nucleotide excision repair
mis03430
Mismatch repair
mis03440
Homologous recombination
mis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MICPUN_105511
03420 Nucleotide excision repair
MICPUN_105511
03430 Mismatch repair
MICPUN_105511
03440 Homologous recombination
MICPUN_105511
03460 Fanconi anemia pathway
MICPUN_105511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mis03000
]
MICPUN_105511
03032 DNA replication proteins [BR:
mis03032
]
MICPUN_105511
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_105511
Transcription factors [BR:
mis03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MICPUN_105511
DNA replication proteins [BR:
mis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MICPUN_105511
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MICPUN_105511
MMR (mismatch excision repair)
MICPUN_105511
DSBR (double strand breaks repair)
HR (homologous recombination)
MICPUN_105511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_2
DUF223
zf-CCHC_5
zf-CCHC_3
eIF3g
Motif
Other DBs
NCBI-GeneID:
8243244
NCBI-ProteinID:
XP_002501959
JGI:
MicpuN3_105511
UniProt:
C1E508
LinkDB
All DBs
Position
4:complement(join(1505821..1508140,1508276..1508474,1508652..1508736))
Genome browser
AA seq
867 aa
AA seq
DB search
MAEFDLDVGAAMRLYHGDDGLMPTLQIADLRALQSKDGNSDDSNKRFRVMLSDGQHYVTA
MLSSQLNPLVLDGKLEKFTVVKLTEYLCQTINNRKIIIALQLNVGGKPLDIIGQPIACEQ
AASSGDAPQPPMGGNQPSAPRTLGAGGNYGQPQNTYGGAGGNYGQPQQTFGNYGNYGGGV
PGGNYGAPPGGGQPPAGQPAPSYGGYGANPNQQNIPPQYSNRGAVMRNEAPHRITPISSL
NPYMNRWTIRVRVTNQPAIRTWHNARGDGKVLNVDLLDSEGGEIKAVCFNDTAEKFSQVF
QGGRVYDISKGAISQVKNKKYSGGAEFEIRLDNTSLVDEVTDPQAVASIKKIHYNFQKIA
SIEDAMVGGMIDVIGVVHTVGDLATIMKRDGGETSKRSVHIRDDSGASVELTMWAPHAVD
IGGKLEAMVNGGEHPVLAVKNGRVGEFQGKNIGTVGSTNIDVNPDLTEAAKLRHWYDAEG
GATATVATLGGGGGGGGKGDRCVSIAQLKDEIAQIGANPPFWVQCRCHITYIKAPQDSGP
YYPACPLQNGDRMCQKKLRFDEAQGSWNCERHSGEHVPHCEWRYILNMTVSDHTGQHWVS
AFGDQGDVIMGMKASELHRLYNDNHAAYEQALQNANFTSHMMKLKVKEDNYNGETRPKTE
LSRIEVIDYVAESKRMLDKIAKLHAGQSIDEPRPPARGSMGMGGAYGANAGMNGGAPPPA
YGGAAGGFGGQGFNNDAGWNQGGGGAGGNYNNYGGDAGGGWGGGGGGGGGGGQSGQCFTC
GQTGHWTRDCPNKQGGGGQYGGGGGRGGGSGGKSGKCHKCGQLGHWARDCPGGGGGGYGG
GGGYGGGGGGYGGGGGGGGWGGGGGEW
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttcgatctcgacgtcggcgcggccatgaggctgtaccacggcgacgacggg
ctgatgcccacgctccagatcgcggatctacgcgcgctccagagcaaagacggcaactcc
gatgactcgaacaaacgattccgcgtgatgctctccgacggccagcactacgtcactgcc
atgctcagctcgcagctcaacccgctcgtactcgacggaaaactcgagaagttcacggtc
gtcaagctcaccgagtacctctgccagacgatcaacaaccgcaagatcatcatcgcgctc
cagctcaacgtcgggggcaaacccttggacatcatcggccagcccatcgcgtgcgagcaa
gccgcgtcgtccggcgacgcgccccaaccgccgatgggtggaaaccagccctcggctccg
cgcaccctgggagcgggtggcaactacggtcagccgcagaacacctacggcggcgcgggt
ggcaactacggtcagccccagcagacgttcgggaactacggcaactacggcggcggcgtc
ccgggcgggaattacggcgctcctcccggcggcggccagcccccggcgggccagcccgcg
ccgtcctacgggggctacggcgccaaccccaaccagcagaacatcccgccgcagtactcc
aaccgcggtgccgtgatgcgaaacgaagctccgcacaggatcaccccgatctcctctctg
aacccgtacatgaaccgctggacgatcagggtgcgggtcaccaaccagcccgcgattcga
acctggcacaacgcgaggggcgacggtaaggttctcaacgtcgacctgctggactccgaa
ggcggcgagatcaaggctgtgtgcttcaacgacaccgcggagaagttctcacaggttttc
caaggtggtcgcgtgtacgacatctccaagggggccatctcccaggtcaagaacaagaag
tacagcgggggagccgagtttgagattcgcctcgacaacacctccctcgtcgacgaggtc
acggatccgcaggctgtcgcgagcatcaagaagatccactacaactttcagaagatcgcg
tccatcgaggacgccatggtgggtggcatgatcgacgtcatcggcgtcgtgcacaccgtc
ggcgacctcgccaccatcatgaagcgcgacggcggcgagacgagcaagcgctcagtgcac
atccgcgacgacagcggcgcatccgtggagctcacgatgtgggcgccgcacgcggtcgac
atcggcggcaagctcgaggccatggtcaacgggggcgagcaccccgtgctcgcggtcaag
aacggccgcgtgggtgagtttcagggcaagaacatcggcaccgtcggctccaccaacatc
gacgtcaatcccgacctcaccgaggctgccaagctcaggcactggtacgacgcggagggg
ggcgcgacggcgacggtggccaccctcggcggcggcggcggcggcggcggcaagggcgat
cgctgcgtctcgatcgcgcagctcaaggatgagatcgcccagatcggggccaacccccct
ttctgggtgcagtgccgctgccacatcacctacatcaaggctccccaggactcgggccct
tattatcccgcgtgtccgctccagaacggcgaccgcatgtgccagaagaagctcaggttc
gacgaggcccagggctcctggaactgcgagcgccactcgggtgagcacgttccccactgc
gagtggcgctacatcctcaacatgaccgtctccgatcacaccggtcagcactgggtctcc
gcgtttggcgaccaaggagacgtcatcatgggcatgaaggcttccgagctgcaccggctg
tacaacgacaaccacgccgcgtacgagcaggcgctccagaacgccaacttcacctcgcac
atgatgaagctcaaggtcaaggaggacaactacaacggcgagaccaggcccaagactgag
ctcagcaggatcgaggtaatcgactacgtcgccgagtccaagaggatgctggacaagatc
gccaagctccacgcgggtcagagcatcgacgagccacgacctcccgctcgcggatccatg
ggcatgggcggcgcctacggtgctaacgcgggcatgaacggcggcgctcctcccccggcg
tacggcggcgcggccggcggcttcggcggccagggtttcaacaacgacgcaggatggaac
caaggcggaggcggagcagggggaaactacaacaactacggcggcgacgccggcggcggc
tggggaggaggaggaggaggaggaggaggaggcggccagagcggccagtgctttacttgc
ggtcagaccggccactggaccagggactgccccaacaagcagggcggtggaggccagtac
ggcggcggcggcggcaggggcggcggttccggtggaaaatctggaaaatgtcacaagtgc
ggccaactcggccactgggccagggattgtccgggaggcggcggcggcggctacggcggc
ggcggcggctacggcggcggcggtggcggctacgggggaggaggaggtggtggcggatgg
ggcggcggcggcggggaatggtaa
DBGET
integrated database retrieval system
