Micromonas commoda: MICPUN_106275
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Entry
MICPUN_106275 CDS
T02695
Name
(RefSeq) predicted protein
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_106275
Membrane trafficking [BR:
mis04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
MICPUN_106275
Protein recycling
Other Rab GTPase associated proteins
MICPUN_106275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
8247401
NCBI-ProteinID:
XP_002504979
JGI:
MicpuN3_106275
UniProt:
C1EEH8
LinkDB
All DBs
Position
11:join(769397..769488,769591..771013)
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AA seq
504 aa
AA seq
DB search
MADGDQGMPLTFQNFLEKMRHPSASELVKSMQAFISSFGDAQMPANAQRDSDEDGRRIQA
FLRDTEAAFRGHPAWRGASEEELEASGEGLEKYLTTKLYPNIFAVVNEERTLDDVLGRRI
AALRTFIRPEHLDIPECFRVEASLALARNELVKVNNFKAPRDKLVCVLNTCRVINNLLNV
SAGNRPAGADDFLPVLIYVVMLANPPRLESNLRYIARFRLESRLVSEAAYFYTNLVSATH
FLTTCDHSAFTNLDEDVFEAHMAAEGFAVGPDAAGSFDGERGGDGATGGGAGEGRGGDTG
ARGSLAEKMLREGAPGATPPPAPRDVPGLPPRSPNGTASVALEKDRARLERELADAKREL
AGANARARHPLRWSTVEDVEAEGAASLATENGAGTLRLPYKFLYARADDLQVGDVPALLN
AYKTIALQYEALSRGVGAVLADVTPNSAIRSGADVDGLSMFANIGASSPAAEDVFAGMTI
TEGERHAGIEPEDPFARLEALTQR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgatcaggggatgccgctcacgttccaaaatttcctcgagaagatgcgg
caccccagcgcttctgagctcgtgaaatccatgcaggctttcatatcgtcgttcggcgat
gctcagatgccggcgaacgcgcagcgggactcggatgaggacggccgaaggatccaggcc
ttccttcgcgacaccgaggctgctttccgagggcaccccgcgtggaggggcgcgtccgaa
gaagagctggaggcgtccggggaagggctcgagaagtatctcaccacgaagctgtatccg
aacatattcgcggtcgtcaacgaggaacgcacgctggacgacgtcctcgggcgacgcatc
gccgcgctgcgaacgttcattcgacccgagcacctggacataccggagtgctttcgtgta
gaggcgtccctggcgctggcccgcaacgagctcgtcaaggtgaacaacttcaaggcccca
agggacaagctcgtgtgcgtgctcaatacctgccgcgtcatcaataacctcctgaacgta
tccgccgggaaccgacccgcgggtgccgacgacttcctccctgtgctcatctacgtcgtg
atgctggccaacccgccgcggctggagtccaacctgaggtacatagcgcggttcaggctt
gagtccaggctggtgtccgaggctgcatacttttacaccaacctcgtgtcagccacgcac
tttttgaccacgtgcgaccactcggcgttcacgaacctggacgaggatgtgtttgaggcg
cacatggcggccgagggattcgccgtcggacccgacgcggctggttcgttcgacggggag
cgagggggcgacggggcgacggggggcggggctggtgagggacgaggaggtgatacgggc
gcgcgtgggagcctggcggagaagatgttgcgcgagggagcgccgggggcgacgccgccg
cccgcgccgagggacgtccccggtttgcccccgcggtcgcccaacgggacagcctcggtc
gcactggagaaggatcgcgcgcgtctggagcgcgagctcgcggatgcgaagcgcgagctc
gcgggtgcgaacgcccgagcgcggcatccgcttcgatggtccaccgtggaggacgtggag
gctgagggcgcggcgagtttggccaccgagaacggcgccgggacccttcgcctgccgtac
aagttcctttacgcaagggcggatgatcttcaggttggggacgtacccgcgctcctgaat
gcgtacaagacgatcgctctgcagtacgaggcgttatcgaggggcgtgggcgcagtgttg
gctgatgtgactcccaactcggcgattaggagcggcgctgatgtggacggtctgagcatg
tttgcaaacatcggggcaagctccccggcggcggaggatgttttcgcgggtatgacgata
acggaaggggagaggcacgccgggatcgagccagaagatccgttcgctcgactggaggcc
ctgacccagcgatga
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