Micromonas commoda: MICPUN_106869
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Entry
MICPUN_106869 CDS
T02695
Name
(RefSeq) coatomer protein complex
KO
K05236
coatomer subunit alpha
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_106869
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_106869
Membrane trafficking [BR:
mis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
MICPUN_106869
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MICPUN_106869
Exosomal proteins of bladder cancer cells
MICPUN_106869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
Zn_ribbon_19
Auto_anti-p27
DUF7129
DUF7385
Motif
Other DBs
NCBI-GeneID:
8242780
NCBI-ProteinID:
XP_002501894
JGI:
MicpuN3_106869
UniProt:
C1E4N8
LinkDB
All DBs
Position
4:complement(join(1284169..1287671,1287929..1288118,1288300..1288317))
Genome browser
AA seq
1236 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVSFH
SSQPLFVSGGDDYKIKVWNYKLRRCLYTLLGHLDYIRTVQFHQEYPWIVSASDDQTIRIW
NWQSRSCISVLTGHNHYVMCASFHVKEDLVVSASLDQTVRVWDIGGLRKKSVAPGGEDPF
SRHMPKEMRGDDLFGGGDAVVKYVLEGHDRGVNWAGFHPSLPLIVSGADDRQVKLWRMND
TKAWEVDTLRGHVNNVSCCMFHARQDIIVSNSEDKSIRVWDMSKRTGVQTFRREHDRFWI
LAAHPEVNLLAAGHDSGMIVFKLERERPAYAQHQGTLYYVKDRYLRAYDYGSNRDSPLIS
VRGARGGNAGAPRSMSYNPAENAVLVNFDAEGGSYELHVLPKGGGGGAEPVDSRRGVGSS
AVFVARNRFATLDKGAHEIQIKNLKNEVTKRCAPPDATCDGIFYAGTGTLLCRCEDKMIL
YDVQQRSTMAELATPSVKYVVWSSDMSLVAMLSKHAIVIANRKLGQAVTVHETIRVKSGA
WDDSGVFVYTTLNHIKYALPNGDSGIIRTLDTPVYLTKVFGGVVYCLDRDGRNRQIQIDT
SEYMFKLALIQRKYDQVLAMIKSGALCGQSIIAYLQNKGFPEVALHFVKDERTRFDLAIE
CGNIEVALAAAQELDDKDTWHELGVQALRQGNYQIVEFAYQKTKNFERLSFLYLITGNTE
KLRKMLKIAEMRSDVMGQFHNALYLGDIPERLRILEESGQYPLAYLTAKTHGMEEDASRL
ETILTEAGCTVPEVDGTGVLLVPPEPITLGDNWPLLTVSKGFFEGVLAGDISASDYVMEE
GEDAGAGWGDDLDLDLGGDEGAKEKEEDPLAGLGLGDDDEREGDGEDDGSDAGWDMEDLE
LPADLGAGADDGADAGVSEVFVAPTAGVPVARRWTQKSAIPGEHAAAGDFDSAMKLLNRQ
LGVVNFAPLRQHFIDAALATHAAMSGVTSAPSLSFPLGRNWNSDLAPGVGCAPALVSSLP
LLEDRLKLAYKTTTEGKFGEALKMFQGIIHSIAVLLVETRREVDEVRELLGIAREYASAL
RIEIKRKEYKDDPKRAAELAAYFTHCAMQPIHLSLSLRSAMSIFFKLKNFNTAAEFSRRL
LELSPPVKVAQQAKQVLQACERENKDEVELDYDSRNPFVVCAATFTPIYRGTADVACPTC
GARFVKEQEGTVCPVCNLGKVGADATGLVCSPEQRK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaagagcaaccgcgtcaagggcctgtcgttccacccgaag
cgcccatggatcctcgcgtccctgcacagcggtgtgatccagctgtgggactatcgcatg
ggtaccctgatcgatcgcttcgacgagcacgacggtcccgtgcgcggcgtgagcttccac
agctcccagccgctgttcgtgtcaggaggtgacgactacaagattaaggtttggaactac
aagctgcgccggtgcctctacaccctgctggggcacttggattacatccgcacggtgcag
ttccaccaggagtacccgtggatcgtctccgcgtccgacgaccagaccattcggatctgg
aactggcagtcccgcagctgcatcagcgtcctgaccggccacaaccactacgtcatgtgc
gcctccttccacgtcaaggaggatctcgtggtgtccgcgtcgctggatcaaaccgtgcgt
gtctgggacatcggcggccttcgcaagaagagcgtcgcgcccggcggggaggatccgttc
agcaggcacatgcccaaggagatgcgcggcgacgacctgttcggcggtggcgacgcggtg
gtcaagtacgtcctcgagggtcacgacaggggcgtcaactgggcggggttccacccgtcc
cttccgctcatcgtctccggcgcggatgaccgccaggtgaagctgtggcgcatgaacgac
accaaggcttgggaggttgacaccctccgcgggcacgtcaacaacgtctcgtgctgcatg
ttccacgccaggcaggacatcatcgtgtcaaactcggaggacaagtccatccgcgtctgg
gacatgtccaagcgcacgggggtgcagaccttccgaagggaacacgacaggttctggatt
ctcgccgcgcaccccgaggtgaacctcttggccgccggccacgactcgggcatgatcgtc
ttcaagctcgagcgcgagcgcccggcctacgcccagcaccaggggaccctctactacgtc
aaggatcgatacctcagggcttacgactacggctccaaccgcgattccccgctcatctcc
gtccgcggcgctaggggcggcaacgccggcgcgccccgctccatgagctacaacccggcg
gagaacgccgtcctcgtcaacttcgacgcggagggtggctcgtacgagctgcacgtcctc
cccaagggcggcggcggcggcgccgagcccgtggactcccgccgcggcgtcggctcctcc
gccgtctttgtcgccaggaatcgcttcgcgacgctcgacaagggggcgcacgagattcag
atcaagaacctcaagaacgaggtgaccaagcggtgcgccccgcccgacgccacgtgcgac
gggatcttctacgccggcaccggcaccctcctgtgccgatgcgaggacaagatgatactg
tacgacgtccagcagaggtccacgatggcggagctcgcgacgccgtccgtcaagtacgtc
gtctggtcctcggacatgtccctggtggcgatgctgtccaagcacgcgatcgtcatcgcc
aaccgcaagctcggccaggcggtgaccgttcacgagaccatcagggtcaagtccggcgcg
tgggacgacagcggcgtctttgtgtacacgacgttgaaccacatcaagtacgcccttcca
aacggagactctggcatcatccgcacgctggataccccggtgtacctcaccaaggttttc
ggcggcgtcgtgtactgcctcgacagggacggtcgcaacagacagattcagatcgacacc
tccgagtacatgttcaagctcgcgctcatccagcgcaagtacgaccaggtgctcgccatg
atcaagtctggcgcgctgtgcggccagagcatcatcgcgtacctccagaataagggtttc
cccgaggttgcgctgcactttgtcaaggatgagcggacccggttcgacctcgcgatcgag
tgcggaaacatcgaggtggcgctggccgccgcgcaggagctcgacgataaggacacctgg
cacgagctcggcgtccaggcgctgaggcagggtaactaccagatcgtcgagtttgcgtac
cagaagaccaagaacttcgagcgcctttccttcctgtacctcatcaccggcaacaccgag
aagctcaggaagatgctcaaaatcgcggagatgcgcagcgacgtcatgggccagttccac
aacgcgctctacctcggcgacatcccggagaggctgcgcatcctggaggagtctggccaa
taccccctcgcgtatctcaccgccaagacccacggcatggaagaggatgcgtcgcgactc
gagacgatcctgacggaggctgggtgcaccgtccccgaggttgacggcaccggcgtgctc
ctcgtcccacccgagcccatcaccctcggggacaactggcctctgctcaccgtctccaag
ggcttcttcgagggcgtcctggctggggatatctcggcgagcgattacgtcatggaggag
ggcgaggacgccggcgcgggctggggcgacgacctcgacctcgacctcggcggggacgag
ggggcgaaggaaaaggaggaggatcccctcgcggggctcgggttgggcgacgacgacgag
cgcgagggcgacggcgaggacgacgggtccgacgcgggttgggacatggaggacctcgag
ctcccggcggatctcggagcgggcgccgacgacggggccgacgccggggtgagcgaggtg
ttcgtggcgcccaccgcgggggtgcccgtggcgaggcgatggacgcaaaagtccgccatc
cccggcgaacacgccgccgcgggcgactttgacagcgcgatgaagctgctgaacaggcag
ctcggcgtggtgaactttgctccgcttcgtcagcacttcatcgacgccgcgctggcgacg
cacgcggcgatgtccggcgtcacctccgcgcccagcctctccttcccgctcggacgcaac
tggaacagcgacctcgcgcccggcgtgggctgcgctcccgctctcgtctcttcgctgccc
ctgctcgaggataggctcaagctcgcgtacaagacgacgacggagggcaagtttggcgag
gcgctcaagatgttccagggtataatccactccatcgcggttctcctggtggagaccagg
cgcgaggttgacgaggtgcgggagcttctgggcatcgcccgcgagtacgccagcgcgctt
cgcatcgagatcaagcgcaaggagtacaaggacgatccgaagagagccgcggagctcgcg
gcgtactttacgcactgcgcgatgcagccgattcacctctcgctgtccctgaggtccgcg
atgtcgatcttcttcaagctgaagaacttcaacaccgccgcggagttttccaggcggctg
ctcgagctgtcgcccccggtcaaggttgcgcagcaggcgaagcaggtgctgcaggcttgc
gagcgcgagaacaaggacgaggttgagctcgactacgactcccgaaacccctttgtggtt
tgcgccgcgacgttcacgcccatctacaggggcacggcggacgtcgcgtgccccacttgc
ggcgccaggttcgtgaaggagcaggaggggacggtgtgcccggtgtgcaacctcggcaag
gttggcgccgacgccaccgggctcgtgtgcagccccgagcagcgcaagtga
DBGET
integrated database retrieval system
