Micromonas commoda: MICPUN_107017
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Entry
MICPUN_107017 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12830
splicing factor 3B subunit 3
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_107017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_107017
03041 Spliceosome [BR:
mis03041
]
MICPUN_107017
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_107017
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MICPUN_107017
Spliceosome [BR:
mis03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
MICPUN_107017
Complex B
MICPUN_107017
Complex C
U2 SnRNP specific factors
MICPUN_107017
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
MICPUN_107017
TFTC complex
MICPUN_107017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
8245419
NCBI-ProteinID:
XP_002508076
JGI:
MicpuN3_107017
UniProt:
C1FF93
LinkDB
All DBs
Position
8:complement(4709..8308)
Genome browser
AA seq
1199 aa
AA seq
DB search
MFLYNLTLQKGGGVQCAVYGNFSAPKAQEIVVSRNKVLELLRPDESGKMQTIVSTEVFGV
IRSLAAFRLTGANRDYLVCGSDSGRIVVLQYDKERNRFDKVHQETFGKSGCRRIVPGQFL
CVDPKGRAIMIAAIEKAKLVYVLNRDTEANLTISSPLEANKSHVVAFHVAALDCGLDNPV
FAAIELDYADADQDSTGEAAAEAQKHLTFYELDLGLNHVARKSSEPIDNGANHLIAVPGG
GDGPGGVLVCAENFIIYKNQGHPDVRAVIPRRNALSGDRGVLIVSSATHRTKQQFFFLAQ
SEYGDIYKVTVEYQKGTEFVSEVKIKYFDTIPPCVSICVLKTGFLFAASEFGNHALYQFQ
GIGDDEDDVESSSATLVETDEGYQPVFFEPRALRNLHPIDDVESLCPVLDMQCHNLVAEE
TPQLYALCGTGPRSTLRVLRQGVALSEMAVSPLPGNPNAVFTVRKSASDEFDAYIVVSFT
NATLVLSIGETVEEVSDSGFLGTVPTLSASLLGDDSLLQVHPGGLRHIRADKRINEWRTP
GRKTVTRVTTNARQVIIALSGGELIYFELDQTGQLMEVEKLETSGDVACLDIGPVPEGHL
RNRFLAVGSFDSTVRILSLGAEDCLQTMGVQALAAAPNSLLMLRDDGSGSIYLNVGLTNG
VLLRADVDSVTGQLSDTRARFLGARPPKLSAVSVQGKAAMMALSSRPWLGHFDLANRFAL
SPLSYEPLEHAAPFSSDACPEGVVAVAGNTLRIVAVERLGEQFNQRTCKLRYTPRQMSVN
VDRNTLAVVECDQSSVPYDERTGLEGAAGEKDTKMDVEGEEDDEEEDEVTMTPAEQFGAP
KAPPGSWASCVRIVDPASASTKQIVEMTGNEAALCCCHVYFPQADELFLAVGSAVSLTFS
PRDSEGGFIHLYRYTQDGGIELFHKTPLDGVPGAMCGFKGRLLVGVGNTLRLYDFGKKKL
LRKVENRNFPNFIKTIHAQGERIYVGDVQESFHYVRYKREDGSMYIVADDVQPRHVTAAC
PLDYDTIAGGDRFGNVFVSRLAQDVSDEIEEDPTGGKTAYGQGALNGASHKINQVTQFHV
GETVCALTKGTLQAGGLESMIYATLMGTLGALMPFGNREDVDFCTHLEMHMRQELPPLLG
RDHLAFRSSYFPVKDVIDGDLCEMYTVLPHEAQRRVAEDMDRTVSEVLKKLEDLRAKVA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacctcaccctgcagaagggaggcggcgtccaatgcgcggtatacggc
aacttcagcgcccccaaggcgcaggagatcgtcgtgtcgcgtaacaaggtgctcgagctg
ctcaggcccgacgagagcggaaagatgcagacgatcgtcagcacggaggtgtttggcgtc
atccgttccctcgccgcgtttcgtctgacgggcgcgaacagggactacctcgtgtgcgga
agcgacagcggccggattgtcgtgctgcagtacgacaaagagaggaatcggttcgacaag
gtgcaccaggagactttcggaaagagcgggtgccggaggatcgtgcccgggcagttcctg
tgcgtggatcccaagggccgcgccatcatgatcgcggccatcgagaaggccaagctggtc
tacgtgctgaacagggacaccgaggcaaatctgacgatctcgtcccctctcgaggctaac
aagtcacacgtggtggcgttccacgtcgccgcgctggactgcggactggacaaccccgtc
ttcgcggcgatcgagctggattatgcggacgccgaccaggatagcaccggcgaggccgcg
gcggaggcgcagaagcacctcaccttttacgagcttgacctcgggctgaaccacgtggcg
agaaagtcaagcgaacccatcgacaacggcgcgaatcatctcatcgcggtgcccggcggc
ggcgacggaccgggcggcgttctcgtgtgcgccgaaaacttcatcatctacaagaaccag
gggcaccccgacgtgcgggcggtgatcccccggaggaacgcgctcagcggcgaccgcggc
gtcctcatcgtttcctccgccacccaccggaccaagcagcaattcttcttccttgctcag
tccgagtacggcgacatctacaaggtcacggtggagtatcagaagggcacggagttcgtg
agcgaggtgaagatcaagtacttcgacaccatccctccctgcgtctcgatctgcgtgcta
aagacgggtttcttgtttgcggcttcggagtttgggaaccacgctctctaccagttccag
ggcatcggcgacgacgaggacgacgtggagtcaagctcggcgacgctggtggagacggat
gagggctaccagcccgttttcttcgagcccagggctctgagaaaccttcaccccatcgac
gacgttgagtccctttgcccggttctcgacatgcagtgtcataatctcgttgcggaggag
accccacagctgtacgccctgtgcggcacgggccctaggtccacgctcagggttcttcgg
cagggtgttgccctttcggagatggcggtgtctcccctaccgggtaacccaaacgcagtc
ttcaccgttcgcaagagcgcgagcgatgagtttgatgcgtacatcgtcgtctcattcacc
aacgccaccctcgtgctgtccatcggtgagaccgtggaagaggtcagcgacagcggattc
ctgggtactgtgcccacgctgagcgcctctttgcttggggatgattcgctcctgcaggtg
caccccggcggtttgaggcacatccgcgcggataaacgaatcaacgaatggaggacgccc
ggcaggaagacggtgacccgagtgaccacaaacgcgaggcaagtcatcatcgcgctgtcc
ggcggcgagctcatttactttgagcttgatcagaccggtcagctcatggaggttgagaag
ctggaaacgagcggagacgtggcgtgcctggacattggaccagttccagagggccatctc
aggaacaggttcctcgccgtgggctcgttcgactccaccgttcgcatcctctccctcggc
gcggaggactgtctgcagaccatgggcgtccaggcgctcgcggcggcacccaactcgctg
ctcatgctccgtgacgacggtagtggctcgatctacctcaacgtcggcctcaccaacggc
gtgcttctccgcgccgacgttgactcggtcaccgggcagctcagcgacacccgcgctcgc
ttcctcggtgccaggccgcccaagctgagcgcggtgtccgtgcagggtaaggctgcgatg
atggctctgtcctccaggccttggctcggccactttgacctcgccaacaggtttgccctg
tcgccgctgtcgtacgagcctctcgaacacgccgcgccgttctcttccgacgcctgtccc
gagggtgtcgtcgcagtcgcgggcaacacgctcaggatcgtcgcggtggagcgcctgggg
gagcagttcaaccagcgcacttgcaagctgcggtacacaccgagacagatgagcgtgaac
gtcgacaggaacacgctcgccgtcgtcgagtgcgaccagtcgtccgtaccttacgacgag
cgcaccggactcgagggtgcggcgggtgagaaagacaccaagatggacgtggagggcgag
gaggatgatgaagaagaggacgaggtcaccatgactcccgcggagcagtttggcgcccca
aaggcaccgcccgggtcgtgggcgtcgtgcgtccgcatcgtcgacccggcgtcggcgtcc
accaagcaaatcgtggagatgacgggcaacgaggcggccctgtgctgctgccacgtgtac
ttccctcaggctgatgagttgttcctcgcggtgggttctgcggtgagcctgacgttctct
cccagggacagcgagggtggattcatacacctgtacaggtacactcaggatggcgggatt
gaattgtttcacaagactcccctcgacggcgttcccggcgcgatgtgcggcttcaagggg
cgactgctcgttggtgttggcaacacgcttcgcctgtacgactttggcaagaaaaagttg
cttcgcaaggttgagaaccgcaactttcccaactttatcaagacgattcatgcgcaaggt
gagaggatctacgtcggtgacgtgcaggagtcgtttcactacgtcaggtacaagcgcgag
gatgggagcatgtacatcgtcgctgacgacgtccagcccagacacgtcaccgccgcatgc
ccgctcgattacgacaccatcgcgggcggcgacaggtttggcaacgtcttcgtcagccgc
ctggcgcaggatgtctcggatgagattgaggaggatcccaccggcggcaagactgcgtac
ggccagggagctctgaacggcgcgtcacacaagatcaaccaggtgacgcagttccacgtc
ggcgagactgtctgcgcgctgaccaagggtacgcttcaggctggagggctcgagagcatg
atttacgcgacgctgatggggacgttgggcgcgttgatgccctttgggaacagggaggat
gtggacttttgcacgcacctggagatgcacatgcgccaggagctgccgccactgctgggt
agagaccacctggcgttcaggagcagctacttcccggtcaaggatgtgatcgacggggac
ctctgcgagatgtacaccgtcctgccgcacgaggcgcagaggcgcgtggcagaggacatg
gaccgaacggtttcggaggtgctgaagaagctcgaggatctgagggcaaaggtggcgtag
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