Micromonas commoda: MICPUN_107336
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Entry
MICPUN_107336 CDS
T02695
Symbol
SRP54C
Name
(RefSeq) type II secretory pathway family
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mis
Micromonas commoda
Pathway
mis03060
Protein export
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MICPUN_107336 (SRP54C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mis02044
]
MICPUN_107336 (SRP54C)
Enzymes [BR:
mis01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MICPUN_107336 (SRP54C)
Secretion system [BR:
mis02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MICPUN_107336 (SRP54C)
Eukaryotic Sec-SRP protein
MICPUN_107336 (SRP54C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
ArsA_ATPase
Zeta_toxin
AAA_22
MeaB
ParA
AAA_31
AAA_33
nSTAND3
GTP_EFTU
AAA_16
MMR_HSR1
AAA_30
ATP_bind_1
APS_kinase
AAA_19
6PF2K
Thymidylate_kin
AAA_17
Motif
Other DBs
NCBI-GeneID:
8250537
NCBI-ProteinID:
XP_002507223
JGI:
MicpuN3_107336
UniProt:
C1FE02
LinkDB
All DBs
Position
1:1133001..1134707
Genome browser
AA seq
568 aa
AA seq
DB search
MEARTKQARAPKGSIWCAQRARKDLRARGCRGLGSRISKGQPFSPLTLSTPAVTEIGFGT
LLYGSRLSAGGSRRGETMLRRASAFGSLTERLNSVWATLKDEDDLSLENIKGPLKDIRRA
LLEADVSLPVVRRFIKNIEQKAIGTRVTKGVNAGQQLTKVVADELCELMGGFGGDSLAFK
DPSMGPTVILMAGLQGVGKTTACGKLALYLKKQGKDSLLVATDVYRPAAIEQLKRLGEQV
KTPVFDMGVRVDPPEVARLGLEKARAEGIDVVIIDTAGRLQVDVHLMEELRATKIATAAD
EILLVVDAMTGQEAAALTAAFDEAVGITGAVLTKMDGDTRGGAALSVREVSGKPIKFTGV
GEKMEALEPFYPERMASRILGMGDVVTLVERAQQVVKNEEAEQMRDKILSATFDFNDFIK
QMEMMGQMGGMDGFMKLLPGMSGMSEREMQEADKSLKVAKSLILSMTSKERQFPDILVAG
ASAKSRRKRIIEGAGRSEKDLSQLIVLFGSMRVKMQKMTAEITGASAEVGLTPQLSEEDM
NTLANEGLRKNVSPGMVRRLRIRRLTGS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcgcacgaaacaggcaagagcaccaaaaggttcaatatggtgcgctcaaagg
gcccgcaaagatcttcgcgccaggggctgtagaggtcttggctccaggatcagtaagggg
caaccgttttccccgctgactttatcgacgccagctgtcacggaaataggcttcggcact
ttactttacggctcgaggctaagcgctggtgggagtcgtcgcggcgagacgatgctccgt
cgcgcttctgctttcggaagcctgactgaacgtctaaatagtgtctgggccacccttaaa
gatgaagatgacctcagcctcgagaacataaaaggtcctcttaaggacattcgtcgcgcc
ttacttgaagcagacgtatcgttgcctgtcgtccgccgctttatcaagaacatagagcag
aaggcaatcgggacaagagtgactaaaggcgtcaacgcaggacagcagctcacgaaggtt
gttgctgatgagctttgtgagctgatggggggtttcggtggagatagccttgcgttcaaa
gatccctccatgggcccaaccgtcattctcatggcaggcctacagggcgtcggtaaaaca
actgcttgtggcaagcttgctctctacctaaaaaagcagggaaaagattctttgctcgtt
gcaacagatgtttatcgtccagctgcgattgaacaactaaaaaggctcggtgaacaagtg
aaaacccccgttttcgatatgggcgtccgcgtagatccgccggaggtcgcacggcttggt
cttgagaaggcgagagcagaaggaatcgacgttgtcatcatcgatactgctggcagactt
caggtcgatgtgcatttgatggaagagttacgggccaccaagattgcaaccgcggcggat
gaaatcttattggtggttgatgcaatgactggccaagaagcagcggccttgacggcagct
tttgatgaggccgtgggtattaccggtgccgtgcttaccaaaatggatggtgacacccgt
ggtggcgcagccctgtccgtgagagaggtgagtggtaaaccgattaaattcacaggtgtc
ggtgagaagatggaagccctagaaccattttatcctgaacgaatggctagtagaattctt
ggcatgggcgatgttgtaactctcgttgagcgcgctcagcaagtcgtgaagaatgaggag
gccgagcagatgcgtgataaaattttgagtgcaacctttgatttcaatgacttcatcaag
cagatggaaatgatggggcagatgggtggcatggatggattcatgaagttgttgccagga
atgagcggcatgagcgaacgtgaaatgcaagaagctgataaatctttgaaggtggcgaaa
tctctcatattgtcaatgacctctaaggaacgccagtttcccgatattctcgtagctggt
gcttcggcaaagtctcgcagaaaacgaatcatagagggcgcagggcgtagtgagaaagat
ctttcccagctcattgttctgtttggcagcatgcgtgtcaaaatgcaaaaaatgacagct
gaaatcaccggcgcatctgcagaggttggcctcacaccgcagcttagtgaagaagatatg
aacacactcgcaaatgaagggctgcgcaagaatgtgtctccaggtatggttcgccggctg
agaatcaggcgtttgacgggctcctga
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