Micromonas commoda: MICPUN_107356
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Entry
MICPUN_107356 CDS
T02695
Symbol
WDR75
Name
(RefSeq) predicted protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
mis
Micromonas commoda
Pathway
mis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MICPUN_107356 (WDR75)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_107356 (WDR75)
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MICPUN_107356 (WDR75)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR75_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
8250591
NCBI-ProteinID:
XP_002507672
JGI:
MicpuN3_107356
UniProt:
C1FEA7
LinkDB
All DBs
Position
1:complement(join(1447954..1450629,1450767..1450832))
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AA seq
913 aa
AA seq
DB search
MHDGSRPCHLAGGQLTSRGVLVAIYICVGSIVKAFCAVSGSPLTHCLEGHRADVTAITFH
PAHPEGKVLLTGSLDGTLRTWNTNDFSLNTLFIAPGPVESLVISPPDGARQHDLAFLTCS
RRCTDRGFVDGSHVYAYSLSTGRIVERLAKMSSIPTLVTSSCGDVFGVFERNTILIWSSN
CRKNSIAKTRVRLHHTKQFTALALHHTSRFVAAGDVTGRILLWYNVLAGMCEDGQKRRFQ
SITTQSSLSGSKFDVLECSPNCTFHWHSQPVKCLLFSADGMHLVSGGAESVMVVWKLDEA
RKSYLPRLGAPLSKIFHFPRDASRVVVACVDNSLRVVSLSSLATECTIQGIRPSSSDYGM
YNAKAVLSTSRDPKICSSIESRLHSFSKADTPTCLAIDPTSGALASSAAGAKVQLFDFTQ
DSHISDVHVSSNDHTSHADMIGGLEEIVTQLVFSPDGFSLATVSRRSEGASSRLDKLARA
RRAQCFSSCTEYICTETLKIWERRENIPSNDSPAHEKRHVRFTCVTTCDAPHKCNVTSVA
FRSNVPKVETLLCTVSMDGEIKLWKRSVFSSNNEILAWSCCSAMFHADQQFTSIFSASFS
SDGSLLATGSYDIVLWGPDSCVRLCGLKNPFRSNKTDRRIFPSASNEPSSHAAQLDIKFI
TGEPLLVTLQARRVVIWNLVTAAVVRNLCLSGVTITAHPSRHTFYVSIQTGEPSLAEGAF
STGNSGPSQIGELGIYILELGGPTLQATRCWESMFGKPKAVLVPRDESMCRITIVTENRL
VVTVKKDCDTRGEEADGQAVQENSHAKFENGQELVPERDDNFTIASHPLKCYFGGTPLPS
ASQSFAASVPSAQAQAAKRIGENAFSTRASTTPYDQKRDGIGATSEISSHKLPQLTTLAP
RFLDNLLARKSYC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgggagtcgaccctgccatctggctggagggcaactgacaagtcgtggagta
ttagtggcgatttatatatgcgtgggaagcatcgtgaaagcattttgcgccgtatcaggc
tcgccattgacccattgcctggaaggtcaccgtgcagacgtgacagccattacgtttcac
ccagcgcatcccgaaggcaaagttctcttgaccgggtcgctcgatggcaccctccgaacc
tggaacacaaatgatttttccctgaacacactcttcatcgcccccggtcctgttgaaagt
ttagtgatctcgcctccagacggagcacgtcaacatgatttggcgtttctaacttgttca
cggaggtgtactgatagaggatttgtggacgggagccatgtctatgcatacagtctttca
accggtcgcatcgtggagcgtttagcaaaaatgtcatccattccgactcttgtgacgagc
tcttgtggtgatgttttcggagtgtttgagcgtaacaccatacttatttggtcaagtaat
tgtaggaaaaattcgattgcaaaaacaagagtgcggctgcatcacacaaagcaattcacg
gctttggctctccaccacaccagcaggtttgttgccgccggtgatgtaacaggtcgtata
ttactttggtacaatgtgcttgctggcatgtgtgaagatggacaaaaaagacgattccaa
tctatcaccacacagagcagcttgagtggttcaaaatttgacgtgcttgaatgctcacct
aattgtacatttcattggcattcgcaacctgtaaagtgtttgttattctcagctgacggc
atgcaccttgtatctggaggagcagaatccgtaatggtggtttggaaacttgatgaagct
cgtaaatcgtacttgcctcgcctcggagcacctctcagcaagatttttcattttccaagg
gatgcatcccgcgtcgtagtagcttgtgttgacaactccctgcgcgttgtgtcgctctct
tccttggcaacagaatgcacgattcaaggaatacgaccctcttcatcggattatggaatg
tacaacgcaaaagcagtgttatcaacatctcgtgatccgaagatctgctcgagtattgaa
tcaaggcttcattctttcagcaaagctgacactccgacctgccttgctatcgatccaaca
tctggtgcgctcgcatcctctgcggcaggtgcgaaagtgcagcttttcgacttcactcag
gactcgcacatctcagatgtacatgtttcatccaacgaccatacctcacacgccgacatg
attggaggactcgaagaaattgtcacacaacttgtttttagccctgatggtttttccctt
gcgaccgtctcccggagatcggagggtgcttcttcaagactggataagctcgcacgagct
aggcgcgcacagtgcttttcctcatgtacggaatatatatgcacggagactctcaagatc
tgggaaagacgtgaaaatattccctccaacgattcccccgcgcatgaaaaaaggcatgtc
agattcacctgcgtaactacctgcgatgctccacataaatgtaatgtgacatcggtcgct
tttcgaagcaacgtgcccaaagtagaaaccctcttatgcacagtttccatggacggtgaa
ataaagctttggaaacggtcagtgttttcctcaaacaacgaaattttggcgtggagttgc
tgctccgcaatgttccatgcagaccagcaattcacctcgatattttcagcgagcttttcc
tcggacggctctttacttgcaacaggtagctacgatattgtgctgtggggtcccgacagt
tgcgttcgcctttgcggactcaaaaatccatttagatctaataagacagaccgcaggatt
ttcccatctgcttctaatgagccatcatcacatgcagctcagctcgatatcaaattcatc
acaggtgaacctctgctggtgaccttacaagctagaagagtcgtaatttggaatctcgtg
acagctgcggtggttcgcaacctatgtttatcaggagttacaattacagcgcatccttca
cgtcatacgttttatgtctcaatccaaactggggaaccctctctagcagagggagcattt
tcgactggaaatagtggaccttcgcaaattggcgagcttggtatctatatcctcgagcta
ggtggtccgacgctgcaagctacgagatgctgggaatctatgtttggcaaaccgaaagct
gttctggtacctcgagacgaaagcatgtgtcgcatcaccatcgtgaccgagaacaggttg
gttgtcacagtaaaaaaggattgcgacacacgaggagaggaggcggacggacaagcagtg
caggaaaattcccatgctaaatttgagaatggccaggaattggtgccagagagagatgac
aacttcaccatcgctagccaccctttgaagtgttattttggcggtacacctcttccttca
gccagccagtcattcgcagcctctgtcccttcagcccaagcgcaagctgcaaagagaatc
ggtgaaaacgcattttccacgcgggcaagcacgactccatatgaccagaaacgagatggc
atcggtgcaacttctgaaatttcatctcataagcttccacagttaacaacactcgcgcct
cgttttctggataacctacttgcacgtaaatcttactgctag
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