Micromonas commoda: MICPUN_107362
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Entry
MICPUN_107362 CDS
T02695
Symbol
DDX49
Name
(RefSeq) dead-box ATP-dependent RNA helicase
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_107362 (DDX49)
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_107362 (DDX49)
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
Helicases
MICPUN_107362 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
8250219
NCBI-ProteinID:
XP_002507294
JGI:
MicpuN3_107362
UniProt:
C1FEE6
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All DBs
Position
1:1542418..1543872
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AA seq
484 aa
AA seq
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MSSPLDGLVVGKEKPSTMGADIQKGISIFNNRKSPTQPRTKTFETSKIGEVVGFPSQEIV
SHEVVEQTGFRSLGLNSWLCENITSMGIATATPVQRGCIPAILAGRDVIGVAQTGTGKTA
AFALPILQILGREPYGIFCLCLTPTRELASQISEQFIAFSAGMTLRCETVFGGENIRTQA
KALMLRPHIAVATPGRLMDHFLHCSAVAKCFENVRCLVLDEADRLLDPGFEAELQAIMHN
LPSANRQTLMFSATITKSISAVQELALGKALLFEALKDTQLAGRCKEEYCFIAPRVKEVY
LVHILKRAPTWGTRSMIVFAGTVRKCQMLKEILSVLGINCVALHAAKKQARRHASLSRFK
SGEIQIMIATDIASRGLDIPTVDMVVNYDVPLIPRDYIHRIGRTARAGRVGRAITLVTQH
DISLVHQIEQLTCRKLVELSKLSEEAILKDMAQVFAARRIANLNMGAAGGFNEILRQKRS
KCTK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcctcttgatgggctggtcgtgggtaaagagaaaccttcgaccatgggagca
gacatccaaaaaggtatttcaatattcaacaacaggaaatctccgacacaaccgagaaca
aaaaccttcgagacatcaaagatcggggaagtggttggttttccttcccaagaaattgtg
agccatgaagtcgtcgagcaaactggttttcgatcactaggactgaacagctggttgtgt
gaaaatataacctcgatgggaatcgccaccgcgacaccggttcaacggggttgcataccc
gcaattttggcaggaagagatgtcatcggagtggcgcaaactggcacaggaaagacggca
gcgttcgctctccctattttacagatacttggacgagagccttatggaattttttgcctt
tgtttgacaccaaccagagaactagcatctcagatttcagaacagtttattgctttttcg
gcagggatgactctccgctgcgaaaccgtttttggtggcgagaatatccggacgcaggca
aaggctctgatgctgagaccacacatagcagttgcgacaccgggcagacttatggaccat
tttcttcactgctctgcagtcgctaaatgttttgaaaatgtcaggtgcctggttctcgac
gaagctgacaggctgctagatccgggatttgaagcggagcttcaagccatcatgcacaac
ttgccatcagctaatcgccaaaccttgatgttttcagctaccatcacgaagtccatatcc
gctgtacaagaactagcccttggcaaagcattacttttcgaggcccttaaggatacacaa
cttgcaggccgctgcaaagaagaatattgctttatcgcaccaagggtgaaagaagtatat
cttgttcatatactgaaaagagcaccgacatggggaacgaggtcgatgattgttttcgct
ggaacagttcgaaaatgtcagatgctgaaggaaattctttcagtcttgggaataaactgt
gttgccttacacgctgccaagaaacaagcacgcagacatgccagcctctcgcgattcaaa
tctggcgaaattcaaataatgattgctactgacattgcatcacgcggccttgatattcca
acggttgacatggttgtaaactatgatgtgcccttaatcccccgggattatattcatcgg
atcgggcgcactgcacgggctgggcgggttggcagagccatcacacttgtgacacagcat
gacatttccttggtgcatcaaatcgaacaactcacctgtagaaagctagttgagctttct
aaactttctgaggaagctattctgaaagatatggcgcaggtctttgcagcaaggcgaatt
gcgaacctgaacatgggtgcagctggtggtttcaatgaaatccttcgtcagaaaagatca
aagtgcacaaaatga
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