Micromonas commoda: MICPUN_107434
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Entry
MICPUN_107434 CDS
T02695
Symbol
RRP5
Name
(RefSeq) predicted protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_107434 (RRP5)
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
Other 90S particles
MICPUN_107434 (RRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
OB_RRP5
HAT_PRP39_C
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Suf
TPR_19
CvfB_2nd
TPR_15
UTP6_C
TPR_CcmH_CycH
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
8246527
NCBI-ProteinID:
XP_002504340
JGI:
MicpuN3_107434
UniProt:
C1ECK5
LinkDB
All DBs
Position
9:join(835255..835422,835624..841512)
Genome browser
AA seq
2018 aa
AA seq
DB search
MGAKRTRDEDDAEEAFPRGGSGSGGDDLPRGGNTGGGGGGSGKKRSKKLFDDEDGGATAW
VAGAKKVGDGKYVELLKYKNLRVGMKVLGVVTEVNDRGLTVSLPNGLKGTVTRAEASDVL
APASKRGKKGPDGDDPSEASESESESEEEDEDEDERLDLTSMFQVGQILRCKVRQLGKGK
SGGKRIDLSTRLSQVCSNISGHSLTDGMAVPACVNSVEDHGYVLSFGCSDSPTGFLPRKS
CPQSLVDTLVRGSILDVVIAGDEGKDGKRARSKGPGGVMQCTADPKRVAQAVTHEGDGAA
MSTLLPGMLVNARVKAVLADGLQMNFMTYFTATVDAFHVGGGVHGAAPDPAAAHKTGERV
RARVLYVDAAAKRVGLTLRPHLVTLEASVRAGAMPKPGTIFETAVVRRVDTAIGVLLELK
SENENVHPTFGYCHISDAADEHLDKLEKRFKVGKKVRARVIGSRAMDSVATVSCKSTVLD
QPFLSLEELVPGMQVRGEVVAVEPYGAVVKLAPGVKALCPPNHISDIPGRVTNAKVKEGL
SAKFRVVSVDRVKGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGVFVQL
YGNLRGLAGLQDLGLAADQTPQEAFAVGQVVRATVIRSDRGEQKIKLSLAPGGAVANGND
LDGTPGEKGDVGAPEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDHPLTGA
GLSQAFAPGDEIGPLVALEAKPRRSILSRKASLVEAARGGTLPEDISGVVVGAIYPGYVA
SATANAGVFVRFLGRLTGLAPPSQLTDVPVAGGVDPEEMFALGQTVLARVVSVDATVEPP
RLSLSLAPRGVAASSGVTAEAPLIRSIFTDVDVADRLADERAASGGEAPEGFLTAAANEK
LKVGEEIKGVVHAVREYGVLVDMPDVDPDAVGLVAFHQLPNANGDNEEPKHPAEGEKITG
RVLDVSRREGVVDIGARPSLTGAKVGKKGAKALTTAELKKRKAAQAGAHKLEIGSKVTAE
VELVKPEYAVLSLPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKVTAFVAGNAASGS
PGDRLLLTVPAAKSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTLPNGRKGRLHATE
LAEGAFPMKKIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIARAATDAGGGDGSG
AGIAGTAALATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGDSIAALRKALTS
RFTVGERVKMTALAADVARKKIIVTLRSADKRNVVEGAKIAGIVSKIAPGGGGVFVQLNS
RQHGRVHVTDIADDPRSEPWKLHSVGEAVEVRVLGVGEGGEVDLSMKSSALKSKGSSNGI
SSVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCNLADTFVSDPAQEFPKGKLVK
GTILSVDESSGRAEMTLRSDGMDAAAGRSQIDNNAHVEEGSVQMGTVRRVQTYGVFVTLD
GSGRSGLCHISMFADARIKDSLEQHVRAGERVRVKVLQVDEETGKISLGMKPSLFADDEM
PDGDAGAGMEEDPLMADEDEEMEEDDDDDSADEAEEEEEIDDDDEDAEDDESDEDDDESD
EDDDESDEEGADVLEGDDDVDMDSEDGDDVDEDDEGEDDSDDEDDEDSDDEDLEDDDKGA
VDEDIGFDWDDDKNAKDEEDEEDAADEGPKSKSKSKRERAKEKAAKELELHRKEQALRDK
ADAAPETAQDFEKLIMSSPRSSYVWLRYMAFQMSVGAYDEARSVAERALKAIPADDEDER
MNVWVAYLNLENLHGKPSPREALLKLFDRATKVANPKKLHLTLAGIYERSGQDDMAAQTL
KTATRRFGQSAKVWLAHIRAQILHVGDKNADPESVRKALDRATQSLPKRKHVKVLVQTAL
LEIREGSVERGRTMFESILRNYPKRTDIWSTYIDQEIKQGDPDRTRSLLERATHLDLNPK
SMKFLFKRYLNFEREVGDRQRIEHVKQRALDYVAQKFG
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaagcgaaccagagacgaggacgacgccgaggaggccttccctcgcggcggc
agcggctcgggcggcgatgacctgcctcgtggtggcaataccggcggaggcggcggcggc
tccgggaagaagcgctcgaagaagctgttcgatgatgaagatggcggggctaccgcgtgg
gtcgctggcgccaagaaagtgggcgatggcaagtacgttgagctgctcaagtataagaac
ctgcgtgtgggcatgaaggtgctcggcgtggtgacggaggttaacgatcgaggactcacc
gtctcgctgccgaatggcctgaagggaaccgtgactcgcgcggaggcctccgacgtgctc
gcgccagcgtccaagaggggcaagaagggacccgacggggatgatccctcggaggcgtcc
gagtccgagtccgagtccgaagaggaggacgaggacgaggacgagcgacttgatctgacc
tcgatgttccaagttgggcagattctgcgctgcaaggttcgccagctcggcaagggcaag
agcggcggtaagcgaatcgacctgtccactcgcctctcgcaggtgtgcagcaatatatcc
ggacattctttgacggacggcatggccgtccccgcgtgcgtgaacagcgtggaggaccac
ggatacgtgctgtcctttggctgctcggactcgccaactggctttctgccgcgcaagtcg
tgcccacagtcgttggtggacaccctcgtgcggggttccatcctggatgtggtgattgcg
ggtgacgaaggcaaggatggcaagagagcccggagcaagggccccggcggtgtgatgcag
tgcaccgcggacccaaagcgggtggcgcaggcggtgacgcatgagggtgacggcgccgcg
atgagcacgctgctcccgggcatgttggtcaacgcgagggtgaaggcggtgctcgccgat
ggtcttcagatgaacttcatgacgtatttcaccgcgacggtggacgcattccacgtgggc
ggcggtgtgcacggcgcggcgcccgatcccgcggcagcgcacaagacgggtgagcgcgtg
cgggcgagggtgctgtacgtggacgcggctgccaagagggttggtctcaccttgcgtccg
cacctggtgacgctcgaggcgtcggtgcgagcgggcgcgatgccaaagcccgggaccatc
ttcgaaaccgccgtggttcgaagggtggacaccgccatcggcgtcctgctcgagctcaag
tctgagaacgagaacgttcaccccacctttggctactgccacatatccgacgccgcggac
gagcacctggacaagctcgagaagaggttcaaggttggcaagaaggtgcgcgcgcgagtg
atcggctcgagggcgatggacagcgtggccaccgtgagttgtaagtcgaccgtgctcgat
cagccgttcttgtccctggaggagctcgtacccggaatgcaggtgcgcggcgaggttgtc
gccgtggaaccttacggagccgtcgtgaaactcgcgcccggggtcaaggctctgtgcccg
ccgaaccacatctcggacatccccggcagggtgaccaacgcaaaggtgaaggagggtctc
agcgccaagttcagggtggtgtccgtggaccgcgtcaagggacgagcggtggtgacgcac
aagaaacagctgataaggtccgagctacccgtcgtcgcctcgctcgatgacgcgacgccg
ggtacgacgacacacggcgtcgtcacgggagttgagccctacggtgtcttcgtgcagctc
tacgggaatcttcgcggcctggcgggtctccaggacttgggactcgccgcggatcagacc
ccgcaggaggcttttgccgtcggccaggtggtcagagcaaccgtgattcgctccgacaga
ggtgaacagaagatcaagctctccctcgctccgggtggtgccgtcgccaacggtaacgac
ctcgacggcacgccaggggagaagggcgatgtcggcgccccggagcccggcaccgttgtc
gagtcagcgactgtgaagcgggtcgatgaagccaccggcaacgtccaggtgactctgccc
gggggcgtgcccggcgtggtgaccgccgcgcagatgtccgaccacccgctcacgggtgcc
ggcctgtctcaggcgttcgcgccgggtgacgagatcggcccgctcgtggcgctggaggcg
aaaccccgtcgctcgatcctctcacgaaaagcgtccctcgtggaggctgctcgcggggga
acgcttccagaagacatcagcggcgtggtcgtcggagccatctatccgggttacgtcgcg
tccgcaaccgctaacgccggagttttcgtccgattccttggccgtctcaccggtcttgca
cctccctcgcagctcaccgacgtcccagtcgctggcggcgttgacccggaggagatgttt
gcgctcggccagacggttctcgccagagttgtgtccgtggacgcaaccgtcgagcctccg
cgactttccctgtccctcgcgcctcgcggtgtggcggcgtcgtcgggggtgaccgcggag
gcgccgctgatccggtccatcttcacggacgttgacgtcgccgataggctcgccgatgag
cgcgccgcgagcggaggcgaggcacccgagggtttcctcactgccgccgccaacgaaaag
cttaaagttggcgaagaaatcaagggcgtcgttcacgccgtgagagaatacggtgtgctc
gtggacatgcctgatgtggaccccgatgcggttggtctggttgcgttccatcagctcccg
aacgcgaacggcgacaatgaagagcccaagcatccggctgaaggggagaaaataacgggc
cgtgtcctcgacgtgtcccggcgcgagggtgtcgtcgacattggtgcgcgcccttcgttg
accggggcaaaggttgggaaaaagggcgccaaggcgcttaccaccgctgagctcaagaag
cgcaaggctgcccaggctggagcgcataagcttgagattggctctaaggtgacggcagag
gttgaactcgtcaagcctgagtacgctgtcctttctctgccggatcacggcggtgccatc
gcgtacgcgtctgtgaaccttctgaacaggcgtttcaacgaggatgaggttgagacggag
agattcgcggtcgggcgcaaggttaccgccttcgttgccggcaacgccgcgagtgggtcg
cccggcgataggctcctgctcacggttcccgctgccaagtccaacaagggcgccggatcc
ggggaagcatccgcggtgggcgcgggtctggccatggagggggtggtgaaggaggtgcaa
tccatgcaggccatcttaacgctgccaaacgggcgcaagggcaggctccatgccacggag
ttggccgaaggagcttttccgatgaagaagatcgccgtgggcgccaccttgaacgtcgtc
acgctcggacccgccggcgaccgtgggaacatgctcgagctgaccgtcagacgttccgtg
gaagagagcagggagattgcgcgcgcggcgaccgatgcgggtggtggtgacggatctggt
gcgggcatcgcgggaacagccgcgctcgccacgctctctgagggcgacgagattgacggc
atcgtatcagccgtctctgccgataccctcgccattgccgtcgctcccggcttgactgct
cgtgtgcccaagattgagactggcgattcgatcgctgctctcagaaaggcgctcacgtca
agattcaccgtcggtgagcgcgtcaagatgaccgccctcgccgccgacgttgcaaggaag
aagatcatcgtgacccttcgatccgcggacaagcgaaacgtcgtggagggcgcaaaaatt
gcgggcatcgtctccaagattgcccccggcggaggcggcgtgtttgtccagctcaactcc
aggcagcacggtcgcgttcacgtcaccgatatcgcggatgatcctcgctccgaaccctgg
aagctgcacagcgtcggcgaggcggttgaggtgagggtcctcggtgttggcgagggtggc
gaggttgacctctccatgaagagctctgcgctcaagtccaagggctcatccaacggtatc
agctccgtctcgcagcttgctccgggcgcgcacgtctccgggttcgtcaagcaggtgaac
aagggaggatgcttcgtcgccatctccaggtcggttgacgcgagggtcaagatgtgcaac
ctcgcggatacctttgtctccgaccccgcgcaggagttccccaagggtaagctcgtgaag
ggaaccatcctatcggttgatgagtcctcgggccgcgcggagatgaccctcaggtccgac
ggcatggacgccgccgcgggtaggtcccagattgacaacaatgcgcacgtggaggaggga
agcgtgcagatgggcaccgtgcgacgggtccagacctacggcgtgtttgtcaccctcgac
ggctcgggtcgatcgggtctgtgccacatcagcatgtttgcggatgcgcggatcaaggat
tcgctcgagcagcacgtgcgcgcaggcgagcgcgtgcgggtgaaggtgctccaggttgat
gaagagactgggaagatctccctcggcatgaaaccctccctctttgcggatgatgagatg
cctgacggcgacgccggggctggaatggaggaggatccgctcatggcggatgaggatgag
gaaatggaggaggacgacgacgacgattccgcagatgaggccgaggaagaggaggaaatt
gatgacgatgatgaggacgcggaagatgatgagtccgacgaggatgatgatgagtccgac
gaggatgatgatgagtccgacgaggaaggtgccgatgtgctcgagggtgacgacgacgtt
gacatggactccgaggatggggatgacgtggatgaggacgacgagggcgaggatgattcc
gacgatgaggacgacgaggattctgatgacgaggacttggaagacgacgacaagggtgcg
gtcgacgaggatatcggctttgactgggacgacgacaagaatgccaaggacgaggaggat
gaggaggacgccgccgacgagggaccaaagtccaagtcaaagtccaagcgcgaacgagca
aaggagaaggctgccaaggagctcgagctccaccgcaaggagcaggctctcagggacaag
gctgacgccgcaccggagaccgcgcaggacttcgagaagctcatcatgtcctccccgagg
tcctcatacgtctggctcaggtacatggcgtttcagatgtccgtgggcgcatacgacgag
gcgagatcggttgcggagcgcgctctcaaggccatcccggcggatgacgaggacgagcgc
atgaacgtgtgggtggcgtacctgaacctcgagaacctccacggcaagccatcgccgagg
gaggcgcttctcaagctgttcgaccgcgccaccaaggttgccaacccaaagaagctgcac
ctcaccctcgccggcatctacgagcgatccgggcaggacgacatggctgcccagacgctc
aagacagccacgaggaggttcggccagtccgccaaggtgtggctcgcacacattcgcgct
cagatcctccacgtcggcgataagaatgcagatccggagagcgtccgcaaggcgctcgac
cgcgccacccaatcactgccgaagcgcaagcacgtcaaggtgctggtgcagactgcgctg
ctggagattcgggaggggtcggttgagcgcggtcggaccatgttcgagtcgatcctgagg
aactatcccaagcgcaccgatatttggagcacctacatcgaccaggagatcaagcagggc
gatcccgaccgcaccaggtctctgctggagcgagctacgcacctggacctcaaccccaag
agcatgaagtttttgttcaagcggtacctcaactttgagagggaggttggggacaggcaa
cgcatcgagcacgtgaagcagcgcgcgttggactatgtcgcgcaaaagttcggttga
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integrated database retrieval system
