Micromonas commoda: MICPUN_112657
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Entry
MICPUN_112657 CDS
T02695
Name
(RefSeq) SWI/SNF and RSC chromatin remodeling complex protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mis
Micromonas commoda
Pathway
mis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MICPUN_112657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_112657
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_112657
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
MICPUN_112657
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
MICPUN_112657
PBAF complex
MICPUN_112657
GBAF(ncBAF) complex
MICPUN_112657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
MBT
SWIRM-assoc_3
Motif
Other DBs
NCBI-GeneID:
8243288
NCBI-ProteinID:
XP_002502371
JGI:
MicpuN3_112657
UniProt:
C1E5H3
LinkDB
All DBs
Position
5:complement(join(92300..93671,93730..95462))
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AA seq
1034 aa
AA seq
DB search
MELLQGQEETLGANSPSPRPMVKLSMRHWQDYTPGGSLFMIVRRCVRFKLKKGLRRFDWQ
SEHKRAEFVGMLGDCAEELREKGLLGHVVVYISGDVPAESRELIKASARSMGAVLSASAN
DAAVTHVLHADLDVNGTETKRVFPDKDQAIVRGVVEKEALVHYAGYPTSYDAWCAVSTAR
EHAARDRAHRWDSAPEDDSAIRAASGEHLAIAGRSKPAKHVHYTWIVDSVKYNEWCDEGD
YAWEDPAETAMRAATRARDAANAAMAATAAASAQAQGGGAPKVGEKRKGGPDASVTADDA
SQGTVATHGTGGTAGTAPAPPPEDERVAPPQFAERIGPSVVRQHLTAPHSSVAAVAANDG
GARPTDAKAPGRHHIRGDRGGVVQENISRGQMAGAASEVAAAKKALDDAVADVTDEVIDA
DANGSDDAALTGGTGAGTDSREPYKIPGHSHWFRWHATHELERRGVPEFFDGRSETKTPE
AYAKIRATMMNQYRVAKKAGERLNFTKARRGLVGDVNSLQRVFDFLERWGLINWQPKMDA
GKAAGLGANVPRVVAVDVTRPEKPDPGTFSAANVALYRFPPAPLNGAATSVAEAEAAAEA
AELAAEQHGARRGRPPTNPRPEQPAPSAALQAPLSAYAVLYGNQGNVKRACVGCDADITG
KGTAYYHCARPPPRLAKTNVGGVDVCGRCFSAGKLPDGTTSGCFLRTVATGASSKKAKKA
ARVVSVNEDGEEIEVEDDEDDDDSDAEMEQDDWTDQETLLLLEALETRGESWSDVASHVG
TKSAEECIRRFIRLPIEERFLDELDPNVGGTDAADVRGGGDVGSTEEWRMGRPDVDVRGP
NDLTVPFAGAPNPVMSNVAFLATCVTPRVAAAAAKAALHALDEENKGLTEKGAMDAMDVD
GGGGGGGGGGERTAADVPVTDAGAREAAATGLAAAAVRAKLLADAEEREVQRLIISIAEA
QMKKIEAKMRSFEDLEIGLTREREAIEEMKARLFAERADLRIQKLEHEESVARAKEAQER
REAEAATTTTTTAN
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcagggccaggaggagactctgggcgccaactcaccgtccccgcggccg
atggtcaagctgtccatgcgccactggcaagactacaccccgggcggatcgctgttcatg
atcgtgcgccggtgcgtcaggttcaagctgaagaagggcctccgtcgattcgactggcag
tcggagcacaaacgcgccgagttcgtcgggatgctcggcgactgcgccgaggagctccgg
gaaaaagggctgctgggccacgtcgtggtgtacatcagcggcgacgtcccggcggagtcg
agagagttaataaaagcgtcggctcggtccatgggcgcggtgctgtccgcgtcggcgaac
gacgcggcggtgacgcacgtcctccacgccgacctcgacgtaaacgggacggaaaccaaa
cgcgtcttcccggataaggaccaggcgatcgtgcgcggggtggtggaaaaggaggcgctg
gtgcactacgcgggatacccgacgagttacgacgcgtggtgcgcggtgagcaccgcgcga
gaacacgcggcgcgggaccgagcgcaccggtgggattcggcgccggaggatgattcggcc
attcgcgccgcgtcgggcgagcatctcgccatcgccggaaggtctaagcccgcgaagcac
gtgcactacacgtggatcgtggacagcgtcaagtacaacgagtggtgcgacgagggcgac
tacgcgtgggaggatcccgccgagacggctatgcgagcggctacccgggcgagggacgcg
gccaacgccgccatggcggcgaccgccgccgcctcggcgcaggcgcagggcggcggtgcg
cccaaggttggcgagaagcgcaagggtgggccggacgcgtcagtcacggcggacgacgcg
tcgcagggcacggtggcgacgcacgggacggggggcacggcggggacggcgccggccccg
ccccccgaggatgagcgcgtcgctccgccgcaattcgccgagaggatcggcccgagcgtg
gtgcggcagcacctcaccgccccgcactcgtccgtcgccgccgtcgccgcgaacgacggc
ggcgcccgaccgaccgacgcgaaagcacccggccgacatcatatccgcggtgaccgagga
ggggtggtccaggagaacatatcccgcgggcagatggccggtgcggcgagcgaagtcgcc
gcggcgaaaaaggcgcttgacgacgccgtcgcggacgtgacggacgaggtcatcgacgcc
gacgcgaacggttcggacgacgccgcactcaccggcgggacgggcgccgggacggactcc
cgcgagccgtacaagatccccgggcactcgcactggttccgatggcacgcgacgcacgag
ctggagaggcggggcgtccccgaatttttcgacgggcgatcggagacgaagacgcccgag
gcgtacgccaagatccgcgccaccatgatgaaccagtatcgcgtcgcgaagaaggctggg
gaacggctcaatttcacgaaggcgcgccgagggctcgtaggggacgtcaactcgcttcag
cgcgtgtttgatttcctcgagcggtgggggctgatcaactggcagccgaagatggacgcg
gggaaagccgccggcttgggcgccaacgtccctcgcgtcgtcgcggtggacgtgacgcgt
ccggagaaacccgatcccgggacgttcagcgccgcgaacgtggctctgtacaggttcccc
cccgccccgctcaacggcgcggctacgtcggttgcggaggctgaagccgcggctgaagcc
gccgaactcgccgcggaacagcatggtgcccggcgaggccgcccgcccaccaacccccgg
ccggagcaacccgcgccttcagccgcgttgcaggcgccgctctcggcgtacgcggtgctg
tacggaaaccagggtaacgtcaagcgcgcgtgcgtgggatgcgacgcggacataaccggc
aagggcacggcgtattatcactgcgcgagaccgccgccgcgtctggccaagacgaacgtc
gggggcgtcgacgtgtgcgggcggtgcttctccgccggtaagctcccggacggtaccacg
agcggctgcttccttcgaacagtcgcgacgggggcgtcgagtaaaaaggcgaaaaaggcg
gcccgggtcgtgtcggtcaacgaggacggcgaagagattgaggtggaggacgacgaggac
gacgacgactcggacgccgagatggaacaggacgactggaccgaccaggagactctgctc
ctcctcgaggcgctggagacgcgcggcgagtcctggtcggacgtcgcctcgcacgtaggc
acgaagagcgcggaggagtgcatccgccggttcatccgcctgcccatcgaggagcgcttc
ctggacgagctcgaccccaacgtcggcggtacggacgccgcggacgtcaggggcggcggg
gacgtcgggtccaccgaggagtggcgcatgggcaggccggacgtcgacgtgcggggaccg
aacgacctcaccgtgcccttcgcgggtgcgccgaaccccgtcatgtccaacgtggctttc
ctggcgacgtgcgtgacgccgcgcgtcgccgccgccgccgccaaggctgcgctccacgcg
ctcgacgaggagaataagggccttacggagaagggcgcgatggacgcgatggacgtggac
ggcggcggcggcggcggcgggggcgggggcgagaggaccgcggcggacgtccccgtgacg
gacgccggggctagggaggcggcggcgactgggctggcggcggcggcggttcgcgccaag
ctcctggccgacgccgaggagagggaggtccagcggctgatcatctccatcgcggaggcg
cagatgaagaagattgaggcgaagatgcgcagctttgaggatctcgagattggtctgacg
agggaacgggaggcgatcgaggagatgaaggcgaggcttttcgcggagcgagcggatctg
aggattcaaaagctcgagcacgaggagtccgtggcccgggccaaggaggcgcaggagagg
cgcgaggcggaggcggcgacgacgacgacgacgacggccaactga
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