Micromonas commoda: MICPUN_112732
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Entry
MICPUN_112732 CDS
T02695
Symbol
OLM6
Name
(RefSeq) IFT52 intraflagellar transport protein-like protein
KO
K19681
intraflagellar transport protein 52
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mis03037
]
MICPUN_112732 (OLM6)
Cilium and associated proteins [BR:
mis03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
MICPUN_112732 (OLM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
ABC_transp_aux
DUF4350
Motif
Other DBs
NCBI-GeneID:
8250440
NCBI-ProteinID:
XP_002507117
JGI:
MicpuN3_112732
UniProt:
C1FDE6
LinkDB
All DBs
Position
1:join(526724..526744,526872..528233)
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AA seq
460 aa
AA seq
DB search
MSTADSKGKSGFPCIAFSICKKERYHPNSTPDGFKQWCRHLKASFRLDILTDALSLESLK
GVDVLVFGTPRDEFSNSELDILRSFSKGGGGIMFMLDEGGECMSKTNVNCFTENYGISVN
DDCVVCTSMQTCDHPRAPSVSYRMSNYHKSESLLDRGVVPQLREDGTQRNSHARTLSSEN
VERLSVALPSCTTLRVQKPATIVLSTGRLAYPVQHAVGAVSKGSVKWGECGRIAVLGSGK
MAVDQWYDRADNCKILDLLLHWLVPQFLPKARNLPTEDLDIIDHNYISDMQALANRPRSC
LHETDDSPKDFASLFGSKRIHLFQSITAPETALLRDKISMKVARLSLIAPSYAELLMPMQ
FAAFPAATREHPPPCLELLDLEEEFTSEFKRLNVLSIRGRPTLDDEHIGTFVHDVARVCG
LHIDSMRISQIHDSTPTAILKNIFTHLMHLKSSPIRPVRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgccgactcaaagggaaaaagcggttttccgtgcatcgctttcagtatttgt
aagaaagaaagatatcacccaaactcgacgcccgacggcttcaaacagtggtgtcgtcat
ctgaaggcttcatttcgacttgatattctcactgatgctttgagcctagaaagcttgaag
ggggtggatgttttagtgtttggcactccacgtgatgagttttcgaactctgagttggat
attctgagaagtttctccaaaggcggaggtggcatcatgttcatgcttgacgaaggcggt
gaatgcatgtcgaagacaaatgtaaattgcttcacagaaaactacggaatatctgtaaat
gatgactgtgttgtgtgcacctcgatgcaaacctgcgaccatcctagagcaccatcggta
tcatacaggatgtcaaactatcacaaatccgaatcattattagacaggggtgtagtccca
caacttagggaagacggaacgcaacgaaacagccacgcgcggacactttcatcggaaaac
gttgaacgactatcagtcgccttgccttcttgtacgaccctcagggtgcagaagcctgct
acgattgttctgtcaacggggaggctagcataccctgttcaacatgcagtcggcgcagtt
tcgaaaggatcagtaaaatggggtgagtgtgggcggatcgcagtattaggctctgggaaa
atggcagtcgatcagtggtatgatcgggcagacaattgcaagatactggacttgcttcta
cattggcttgtaccacagtttttgccgaaagcacgcaacttacccacggaagacctcgac
atcatcgaccataactatatatcggatatgcaagcacttgcaaatcgcccaaggagctgt
ctgcacgagacagatgattctccaaaagatttcgcaagtttattcggttcaaagagaata
catttgtttcaaagtattaccgctccagagacggcgctattgcgtgataaaataagcatg
aaagtcgctagactttccctgattgctccaagctatgctgaattgttgatgccgatgcag
tttgccgcattcccggcagcaacccgagaacatccgcccccatgtcttgaacttctagac
cttgaggaagagttcacctcagagtttaaacgactcaacgtgctcagcatacgaggtcgg
ccgacccttgatgatgaacatattggaacctttgttcatgatgttgcacgagtgtgcggc
cttcacatagattccatgagaatctcgcaaatccacgattcaactccaacggctatactc
aaaaacattttcacacatttaatgcacttgaaaagctcgccgataagacccgtacgaagc
tag
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