Micromonas commoda: MICPUN_113355
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Entry
MICPUN_113355 CDS
T02695
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein
KO
K12184
ESCRT-I complex subunit VPS28
Organism
mis
Micromonas commoda
Pathway
mis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
MICPUN_113355 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_113355 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_113355 (VPS28)
Membrane trafficking [BR:
mis04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
MICPUN_113355 (VPS28)
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MICPUN_113355 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
MICPUN_113355 (VPS28)
Exosomal proteins of colorectal cancer cells
MICPUN_113355 (VPS28)
Exosomal proteins of bladder cancer cells
MICPUN_113355 (VPS28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
8250511
NCBI-ProteinID:
XP_002507198
JGI:
MicpuN3_113355
UniProt:
C1FDV0
LinkDB
All DBs
Position
1:join(997093..997464,997541..997661,997883..998133)
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AA seq
247 aa
AA seq
DB search
MDVLLLVDEDPFVSRTERLANLYSLIRSVERLETAYVNSAAHAGAYEAACSELITKYKTL
RNALVDTVPDVHRFMQVEDSPPAICCNAHDDLLCGVTLFIGCASVFCISSRILSWRISMS
ARDVFATARHRLQIGMPATVEHRVVHLGEPPSAVSVAECVHNYIAKDQVAPYLSDLLTSL
YKVRQLPTDFSGTTFVRRWTVQLDKMRASDELGEDEIRQLLYDTENSYNAFMRLLGGHEQ
HVLQHQS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttacttctcgttgatgaggatccgttcgtttcccggacagaacgactagcg
aacttgtattcactaattagatcagtggagaggcttgagacggcatatgtaaatagtgcc
gctcatgctggcgcatatgaagccgcgtgctctgagctgatcactaagtacaaaactttg
cgcaatgctctcgtggacactgtgccagatgtgcaccgttttatgcaagttgaagattcc
cctcctgccatttgctgcaacgctcacgatgatctactttgtggcgtgaccctttttata
gggtgcgcttccgttttctgtatcagctcacgcattttatcgtggcggatctccatgtcc
gctcgtgatgtgttcgcgacagcaagacaccgcttgcagatagggatgccggctactgtt
gagcacagggttgtccatttaggcgaaccgccttcggcagtgagtgttgccgaatgcgtc
cacaactacattgctaaggatcaagttgccccatatctctcagatcttctcaccagtctt
tacaaagttcggcaactcccgacagatttctcagggacaacatttgtcagacgctggact
gtccagctggataaaatgcgcgcaagtgatgagcttggggaagatgagattagacaacta
ctatacgatactgagaactcgtataacgcttttatgcggctgctcgggggacatgagcaa
cacgttctgcagcatcagtcttga
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integrated database retrieval system
