KEGG   Micromonas commoda: MICPUN_113393
Entry
MICPUN_113393     CDS       T02695                                 
Name
(RefSeq) transcription initiation factor subunit A
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
mis  Micromonas commoda
Pathway
mis03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MICPUN_113393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mis03021]
    MICPUN_113393
   03036 Chromosome and associated proteins [BR:mis03036]
    MICPUN_113393
Transcription machinery [BR:mis03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MICPUN_113393
   Coactivators
    SAGA/TFTC/STAGA complex
     MICPUN_113393
Chromosome and associated proteins [BR:mis03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     MICPUN_113393
    STAGA complex
     MICPUN_113393
    TFTC complex
     MICPUN_113393
    SAGA complex
     MICPUN_113393
    SLIK complex
     MICPUN_113393
SSDB
Motif
Pfam: TFIID_20kDa TFIID-31kDa CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 8250037
NCBI-ProteinID: XP_002507101
JGI: MicpuN3_113393
UniProt: C1FDA8
LinkDB
Position
1:join(420711..420758,420824..420904,420986..421144,421237..421299,421355..421504)
AA seq 166 aa
MGDIANEAADAFSTQIKVFHGRRAHSVHEATDAVQAIPRHSLRELLLKAAPGEDIEPAVE
DFLLDLADDFIDSVTSFACKLAAHRRSDTVEMGDIMVHLKRSWDISVSGLGVDGSIKETR
DPNNICGMHNSRMMDMRQAIASSLSQEDMLKEKEVEASKGLPALSR
NT seq 501 nt   +upstreamnt  +downstreamnt
atgggggatatcgccaacgaagctgcggacgccttcagtacgcaaattaaagtttttcat
ggaaggcgggctcactcagtgcacgaggcgactgacgccgtgcaagctattccaagacat
agcttgcgagagcttcttctgaaggctgccccgggcgaagatattgaacccgccgttgaa
gacttcttgcttgatctagccgatgacttcattgatagtgtcacttcgttcgcttgcaag
ttggccgcccacagaagatctgacactgtggagatgggtgacatcatggtacatcttaaa
aggtcgtgggacatatctgtttctgggctcggggttgacggcagcatcaaggaaacgcgg
gatccgaataacatttgtggaatgcacaatagtcggatgatggacatgcggcaagcaatt
gcatcgtcgctgtctcaagaagacatgttgaaagaaaaagaagttgaagcttcaaaagga
ctcccagctttgtcgcgttga

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