Micromonas commoda: MICPUN_113917
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Entry
MICPUN_113917 CDS
T02695
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase I
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mis03032
]
MICPUN_113917 (TOP1)
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MICPUN_113917 (TOP1)
DNA replication proteins [BR:
mis03032
]
Eukaryotic type
DNA Topoisomerases
MICPUN_113917 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
8250408
NCBI-ProteinID:
XP_002507090
JGI:
MicpuN3_113917
UniProt:
C1FD86
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All DBs
Position
1:370484..372391
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AA seq
635 aa
AA seq
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MSDGEDDLPLSTRARVAIAGNESDSDDDVPLSARVPGATTGKRKNMSNRNRPAHKRKSSD
TEDDNSSDDKPIGSLVDISDRKSTTAGGSAKKKTKRADHEPWRAKRGAKQMWSTLEHNGV
VFPPPYQAHGIPLVYDGHDVKLLPHEEEVATFFAVMKDTDYAQKDIFVKNFFDGFKKTLR
GGPHGFIKDFKKCDFTKIYMWNLQERERKKSVSAEEKRKVKAEQAAAEEKYCWATIDGRR
ERVGNYKVEPPGLFRGRGEHPKMGRVKKRIMPEDIIINIGKGAKVPEPLPGHKWKQIIHN
NTVTWLCGWNDTINTKDWKYVQFGATSSIKAESDIQKYEKARKLKLAVDAIRRDYFKKMK
SGSVLEQQLAVTTYLVDKLALRAGGEKDDDLADTVGVCTLRVGHIDFLPPSTIKFDFLGK
DSIRYLQEHEVDPLVFHAMQRFCKGKKKDQDIFDHIDPTKVNKHLQTLMPGLTIKVFRTY
NASYTLNKLLKETTPAGDSTVPMKKAAYDAANKEVAVLCNHQKGVSKAHDAQMEKLQDKK
KIIEKEIAALRRDKKDTNKAKIRTLKERLSKLELQMKMKDELKSVSLGTSKINYMDPRIT
IAWCKHNDVPPPTVYTKALVEKFNWAMEVEPDFDF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggcgaagatgacttgcccctctccacccgcgcgcgtgtcgcgatagctggg
aatgagtccgactcagatgatgacgtgccgctcagtgcacgagttcctggggctaccaca
ggaaaacgcaaaaacatgtcaaataggaacagacctgcacataagcggaaatcctctgac
actgaggatgacaacagcagcgacgacaagcctatagggagtctagtagacataagcgat
agaaagtctacaacggcaggtggttcagcgaaaaagaaaacaaaacgtgccgatcatgag
ccgtggagggcaaaaagaggtgcaaaacagatgtggtcaacgcttgaacacaatggtgta
gtgtttccgccaccttaccaggcacacggaataccgcttgtatatgatggacacgatgtc
aaactcctcccccacgaggaagaggtggcgacattcttcgctgttatgaaggatacagat
tatgctcagaaggacatctttgtgaaaaatttttttgatggtttcaaaaagacgctgcga
ggtggtccacatggttttatcaaagactttaaaaagtgtgactttacgaaaatttatatg
tggaatctgcaagagcgcgagcgaaaaaaatcggtcagcgctgaagagaaaagaaaggtc
aaggccgagcaagcagcagcagaggagaaatattgttgggcaacgattgatggccgacgt
gaaagggttggtaattacaaagtcgaaccgcctggtctatttcgtggacgcggtgagcat
cccaagatgggtagagtcaagaaacgcataatgcccgaagatattataatcaacatcggc
aagggcgcaaaggtcccggagccgttgccggggcataaatggaaacaaattatccataac
aacaccgtcacttggctctgtgggtggaatgacacaattaacactaaagactggaaatac
gtacaattcggtgctacgtcctcgataaaggcagagtccgatatacaaaaatatgaaaaa
gcgcgcaagctcaaactagctgtggatgccattcgacgcgactactttaaaaagatgaaa
tctggctctgtccttgagcagcagctagctgtcaccacttaccttgtcgacaagttagca
cttcgcgcaggtggagagaaagatgacgacctagctgacactgttggagtgtgcactctg
cgtgttgggcatatcgatttcttgcctccctcaactatcaaatttgactttctcggtaaa
gactcaatccgataccttcaggaacacgaggttgacccacttgtttttcacgccatgcag
cgattttgcaagggcaagaagaaggatcaagatatttttgatcacatagacccgacgaag
gtcaataagcatcttcaaacgctgatgccgggtctaacaatcaaggtattccgcacttac
aatgccagctacaccctgaacaagttgttgaaggaaactacaccggctggcgattccaca
gttcccatgaaaaaagcagcatatgatgcagctaacaaggaagtcgcagtactttgcaat
catcaaaagggggtgtccaaagcacatgatgcacaaatggagaaacttcaggataagaag
aagatcatagagaaggaaatagccgcgctacgcagagataaaaaggacacgaacaaggcc
aagataagaaccctgaaggaacgattatcgaagcttgagctgcaaatgaagatgaaggat
gaactcaagtcagtatcgcttggaacatctaagattaattacatggatcctcgtatcact
attgcttggtgtaagcataatgatgtcccaccccccactgtgtacaccaaagcccttgtt
gaaaagttcaattgggcaatggaagtggagcccgactttgacttctag
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