Micromonas commoda: MICPUN_50155
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Entry
MICPUN_50155 CDS
T02695
Name
(RefSeq) predicted protein
KO
K18723
nucleoporin GLE1
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
mis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_50155
03015 mRNA surveillance pathway
MICPUN_50155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_50155
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MICPUN_50155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
8243291
NCBI-ProteinID:
XP_002502004
JGI:
MicpuN3_50155
UniProt:
C1E5I2
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All DBs
Position
5:110673..112832
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AA seq
719 aa
AA seq
DB search
MAIPDWHDDDTDDEDDVLLGVVVSPAVRSPRRPTSGTATRDRSASSLVSTLGKPTGLYGG
SVLGFHERNAGTTAFSPFVPIARTAGGASTPGPGRISLGGLGGSPRVARLRLEDGNEDGD
STGGRLDGGNDGDVRERGDRGARASPSGLPGPSRGLGIGGARALIPPRSPSHAWPPEARL
HLAPGDPNDLVGVDGVTVDDADPAALAYGDAGLRAVSLARNIKHQRAASRRAAAAQRARV
RQEALELELGWALEQEQSANAELARFADELARSIAREDAEAAAAAEREEQRQLDEMDARW
RARDAAVKAVLAADAAESERQKLAAEEADRAAKRAEEEKKRADEAAAAAKKAADEAKAKK
EREDAEAKAKKEREDAAAEAARRAEEERRTGVVTGQRLPSGSVPKIQVAAEASKQEGELA
KLLAEARAKVAEYSTAPAAKRERRVINNNITVHVQQIAATRQQIEKKAVDIAQFLNGFQP
GSIQRTFATVSLAKRVLTQCDSQVSKLNRFAFALAEVSVRVAVFDATFGRVLIALLHEAC
VLAVPKYYPFVQGRYASDDEYFKLMGYVAAEEQPNDLPEGAPPKLETTDNFCRRIQGFML
FYAAYTQCDNPRHPHGINHAWAWVSRLVNRVPPNRFSATALESFVKHAGFALWSAYGAQF
GKILDVVDREFLPTLEAKDDADSRPVVSRMRTYLNERGFLRAPEGREMPNTDTSSNTRL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggccatccccgactggcacgacgacgacacggacgacgaggacgacgtgctcctcggc
gtcgtcgtgtcgcccgccgtccgatccccgcggcgacccacctccgggaccgcgacgcgc
gatcggtcggcgtcgtcgttggtgtccacgctgggcaagccgacggggctttacggcggg
agcgtgctgggcttccacgagcgcaacgccgggacgaccgcgttctccccgttcgtcccg
atcgcgcggaccgcgggtggcgcgtcgaccccgggtcccggacggatctcgctcgggggc
ctgggcgggtccccgcgggtcgcgcggctgcgcctcgaggacgggaacgaggatggggac
tcgacgggagggagactggacggcgggaacgatggggacgtccgcgagcgcggcgaccgg
ggcgcgcgcgcttcgccctcgggtctgcccggtccgtcgcgcggcctcggtatcggcggc
gcgcgcgccctgatcccgccccgatctccgtcgcacgcgtggccccccgaggcgcgcctc
cacctcgccccgggggacccgaacgatctcgtgggcgtggatggggtcacggtcgacgac
gcggatcccgcggcgctggcgtacggagacgcggggcttcgcgcggtgtcactcgcgcgc
aacatcaagcaccagcgcgcggcgtcgcgtcgcgccgccgccgcgcaacgagcgcgcgtg
cggcaggaggcgctggagctcgagctgggatgggcgctggagcaggagcagagcgcaaac
gcggaactcgcgcggttcgcggacgaactcgcgcggtccatcgcgcgggaggacgccgag
gccgccgcggccgccgagagggaggagcagcgacagctggacgagatggacgcgaggtgg
cgcgcgagggacgcggcggtgaaggctgtgctcgcggcggatgccgccgagtcggagagg
cagaagctcgccgccgaggaggcggatagagcggcgaagcgcgccgaggaggaaaagaaa
cgagcggacgaggccgccgccgccgccaagaaggccgcggacgaggccaaggcgaagaag
gagagggaggacgcggaggccaaggcgaagaaggagagggaggacgcggctgccgaagcg
gcgaggcgagcggaggaggagcgccgcaccggcgtcgtcaccggccagagactcccttcg
ggatccgtgccgaagatccaggtggccgccgaggcgtctaaacaggagggcgagctcgcc
aagctcctcgccgaggcgcgcgcgaaggttgccgagtacagcacggcgccggcggcgaag
agggagcgacgggtgatcaacaacaacatcacggttcacgtccagcagatcgcggcgacc
cggcagcagatcgagaagaaggctgtcgacatcgcgcagttcctgaacgggttccagccc
gggtcgatccagcgaacgttcgccaccgtctcgctcgcgaagcgcgtgctgacgcagtgc
gactcgcaggtttcaaagctgaaccgtttcgcgtttgcgttggcggaggtttccgtccgc
gtcgccgtctttgacgcgacgttcggccgggttttgatcgcgctcctgcacgaagcctgc
gtcctcgcggtgcccaagtactacccgttcgtccagggccggtacgccagcgacgacgag
tacttcaagctcatgggatacgtcgccgccgaggagcagccgaacgatttaccggaaggc
gcgccgcccaagctggagacgacggataacttctgcaggcggatccaggggttcatgctg
ttctacgcggcgtacacgcagtgcgacaacccgcggcatccgcacgggataaaccacgcg
tgggcgtgggtctcgaggctggtgaatcgggtcccgcccaacaggttttccgcgacggct
ttggagtcgttcgtgaaacacgccgggttcgcgctgtggtcggcgtacggcgctcagttt
ggaaagattctggacgtcgtcgatcgagagtttttgcccaccctggaggcgaaggacgac
gcggacagcagaccggtcgtgagtcgcatgcgaacgtacctgaacgagcgagggttcctg
agagctccggagggtcgggagatgcccaacacggacacgagctccaacacgcggctgtga
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