Micromonas commoda: MICPUN_50350
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Entry
MICPUN_50350 CDS
T02695
Symbol
CUPC19
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mis
Micromonas commoda
Pathway
mis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUN_50350 (CUPC19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_50350 (CUPC19)
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
MICPUN_50350 (CUPC19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
8243517
NCBI-ProteinID:
XP_002502230
JGI:
MicpuN3_50350
UniProt:
C1E6S9
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All DBs
Position
5:1030836..1032461
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AA seq
541 aa
AA seq
DB search
MTTVHVKFPSEATHATVTVPSPATPAGVCAAVLAARPDLGKMLDAKGQYAGFELSLVDPK
TGRPMNPDDADAVPHDAKMELVLSKGYAVRAFAPVRKYVVGRFSGERPPKFKSGRATAVE
WQLCRQRSDVTGREPNLQLVSESKKGGRVQFNGARESAGLGNFFLLMMQASTTDVCAIPM
EQWYNFRPVANRRVMSLEEAEERLEARGRHTTSTSQWLEKVTKGAMDDDDDGLSDSDDVD
RFKTQAGDSSDDDDENDGKKKKKKKKGTVIKQEPEEEDVKAGNDVGDAPGARGIVKAEGD
DWEHDAGASDDEVAGEGMGDEIEMVDADDAKPPPKTGVGPNDDDEDEDEDLDAEGAKLKR
LLGREEEAATAAELGGFSDNDDSDSEFVDPDQEELHPFLLQQRNKAEQAQIQKAQAAAQA
AQRAAQAAAQAAAAAVVVKPEPVAAGVKRARDDDDANATQSAPAAKAIKTEAGAGAAMRP
IEAALRAILRGASKVTTKDVTKQLRKKGLLGTDEDKEELKSTIGRVAKINKEGAASYVVL
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtgcacgtcaagttcccgagcgaggcgacgcacgcgacggtcaccgtgccg
tcgcccgcgacgcccgcgggcgtctgtgccgcggtcctcgccgcgcgccccgatctcggc
aagatgctcgacgccaaggggcagtacgccgggttcgagctgtcgctcgtggacccgaag
accgggcgcccgatgaaccccgacgacgccgacgccgtcccgcacgacgcgaagatggag
ctggtgctgagcaaggggtacgcggtgcgcgcgttcgcgcccgtgcgcaagtacgtcgtc
gggcggttcagcggcgagcggcccccaaagttcaagtctggcagggcgaccgcggtggag
tggcagctctgccgtcagaggagcgacgtgacagggcgcgagccgaacctccagctcgtc
agcgagagcaagaaaggcggtcgggtgcagttcaacggcgcgcgcgagagcgccggcctc
ggcaacttcttcctcctcatgatgcaggcgagcaccacggacgtgtgcgcaatcccgatg
gagcagtggtacaactttcggccggtggcgaaccgacgggtgatgtccttggaggaagcc
gaggagcgtctggaggctaggggcaggcacaccacgtccacgtcgcagtggctcgagaag
gtgacgaagggcgcgatggacgacgacgacgacgggctgtccgactcggacgacgtcgac
cggttcaagacgcaagcgggtgactcgagcgacgacgacgacgaaaacgacgggaaaaag
aagaagaagaagaagaagggcacggtgatcaagcaggaacccgaggaggaggacgtgaag
gcgggtaacgacgtgggcgacgcccccggagcgcgcggcatcgtcaaggctgagggcgac
gactgggagcacgacgcgggcgcgtcggatgatgaagtagccggcgagggcatgggagac
gagatcgagatggtggacgcggatgacgcaaagccgccgcccaaaaccggggttggtccg
aacgacgacgacgaagacgaagacgaagatctcgacgcggagggtgcgaaactcaagcgg
ctgctcggcagggaggaggaggcggcgacggcggcggagctgggcggcttctccgacaac
gacgactccgactcggaattcgtcgaccccgaccaagaagagcttcacccgtttttgctg
cagcagaggaacaaggctgagcaggcgcagatacagaaggcgcaggcggcggcgcaggcg
gcgcagcgcgcggcacaggcggcggcccaggcggcggcggcagcggtggtggtcaagccc
gagcccgtggcggctggcgtgaagcgcgcgagggacgacgacgacgcaaacgcgactcaa
tccgcgcccgccgccaaggcgatcaagactgaggctggcgcgggggcggcgatgcgcccg
atcgaggctgcgctgcgcgccatcctccgcggcgcgagtaaggtcaccacgaaggacgtg
acgaagcagctgcgcaagaagggcctgctcggcacggacgaggacaaggaggagctcaag
tcgacaatcgggcgggtggccaagatcaacaaagagggcgccgcgagctacgtcgtgctc
aagtga
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integrated database retrieval system