Micromonas commoda: MICPUN_50571
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Entry
MICPUN_50571 CDS
T02695
Name
(RefSeq) predicted protein
KO
K08516
synaptobrevin homolog YKT6
Organism
mis
Micromonas commoda
Pathway
mis04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
MICPUN_50571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_50571
Membrane trafficking [BR:
mis04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
MICPUN_50571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
8246474
NCBI-ProteinID:
XP_002504291
JGI:
MicpuN3_50571
UniProt:
C1ECA3
LinkDB
All DBs
Position
9:641339..641941
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AA seq
200 aa
AA seq
DB search
MVKITALSLWKWNGDNQEPTCLGKTEDVDEFGYFQRSSVREMLTFISRTIVKRTQPGQRQ
SVEQDQYLVHVSNRGGLVAIAVMDKEYPTRAAFSVLGKMSDDYVNRFGDSWKTVSGDDPR
GNEALAAAIVTYQDPHEADKILRIQRELDETKIVLHKTIDSVLARGEKLDNLVDKSTDLS
LASQMFYKQAKKQNQCCTMM
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatcaccgcgctctcgctgtggaaatggaacggcgacaaccaggagcccacg
tgcttgggtaagaccgaggacgtggacgagttcggctacttccagcggagcagcgtgagg
gagatgctcacgttcatcagccgcaccatcgtgaagcggacgcagcccgggcagcgacag
agcgtggagcaggaccagtacctggtccacgtcagcaaccgcgggggcctggtggccatc
gcggtgatggacaaagagtacccgacgcgcgccgcgttcagcgtcctgggcaagatgagc
gacgactacgtgaacaggttcggggactcgtggaagacggtgagcggagatgacccgcgg
ggtaacgaggcgctcgcggcggccatcgtgacgtaccaggaccctcacgaggcggataag
atcctgaggatccagcgcgagctcgacgagaccaagatcgtgctgcacaagaccatcgac
tccgtgctggcgaggggggagaagctggacaacctggtggacaagtccaccgacctctcc
ctcgcctcgcagatgttctacaagcaggcgaagaaacagaaccagtgctgcaccatgatg
tga
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